Pairwise Alignments

Query, 169 a.a., peptide deformylase (NCBI) from Escherichia coli BW25113

Subject, 163 a.a., peptide deformylase (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (474), Expect = 1e-52
 Identities = 96/162 (59%), Positives = 128/162 (79%), Gaps = 2/162 (1%)

Query: 1   MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMY-AEEGIGLAATQVDIHQRII 59
           M VL +L IPDERL++ AKPVE++ A +Q  +DD+ ETMY  ++GIGLAATQV     I+
Sbjct: 1   MPVLDILTIPDERLKRKAKPVEDI-AAVQGFIDDLIETMYHTDDGIGLAATQVGSEHAIL 59

Query: 60  VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119
           VID+SE+RD+ +V+INPE +E+SGE   EEGCLSIP  RA V R EKVK++AL+R+G+ F
Sbjct: 60  VIDLSEDRDQPMVVINPEFVERSGEIVGEEGCLSIPGYRAKVTRFEKVKVKALNREGEAF 119

Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161
           E+E+D  LAI +QHEMDHL GK+F+++LSPLKQQ   +KV+K
Sbjct: 120 EIESDDFLAIVLQHEMDHLDGKVFIEHLSPLKQQIALKKVKK 161