Pairwise Alignments

Query, 481 a.a., predicted peptidase (NCBI) from Escherichia coli BW25113

Subject, 513 a.a., putative modulator of DNA gyrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  347 bits (889), Expect = e-100
 Identities = 188/466 (40%), Positives = 274/466 (58%), Gaps = 6/466 (1%)

Query: 15  GLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGE 74
           G+   DL  +L    E+  DY DL+F+ +   S  L D  + +   NID GVGVR ++G+
Sbjct: 51  GVSEADLKKVLAAALEKGGDYADLFFEHTISNSIRLMDGAVNNSYSNIDYGVGVRVLTGD 110

Query: 75  KTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVE-HSPLYTSVDPLQSMSREE 133
           ++G+AY + I++  + ++A+ A  I   +   K   L   E     YT   P + +S ++
Sbjct: 111 QSGYAYVENITVEDMLKAARTAARIASANKGNKPLNLTEKELKKNYYTVASPWEEVSLKD 170

Query: 134 KLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEE 193
           K+  L++++      DKRV +V AS S     I    ++G +  D RP+V L    ++EE
Sbjct: 171 KMPYLQKLNDRIFALDKRVHKVQASQSDTTSHIFFCNSEGVMFYDYRPMVTLGAVCIMEE 230

Query: 194 DGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLG 253
           DGK E G +    R G++F    L  EV  D  A+EAV    +   A+    G MPVV+G
Sbjct: 231 DGKTENGYAARAYRRGFDF----LSDEV-VDVIAREAVDQTSLLFKAIKPKGGEMPVVMG 285

Query: 254 AGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDD 313
           AG  G+LLHEA+GH  E DFNR+  S+F+ Q+ + V +E   VVDDGT+   RGSV  DD
Sbjct: 286 AGGSGILLHEAIGHTFEADFNRKNVSIFADQLNKKVCNEHINVVDDGTIPFNRGSVNFDD 345

Query: 314 EGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKS 373
           EG  GQ   LI++G+L  Y+ D+++A+  G+ PTGNGRRES+ ++P+PRM  TYM  G  
Sbjct: 346 EGAEGQKTYLIKDGVLTSYLHDRISAKHYGVEPTGNGRRESFRNMPIPRMRATYMEAGNV 405

Query: 374 TPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIE 433
           +  +II SV+ GI+  NF  GQV I +G F F     Y+IE+GK+T+P+K   +IG+G +
Sbjct: 406 SESDIISSVKKGIFVDNFTNGQVQIGAGDFTFFVKSGYMIEDGKLTQPIKDINIIGNGPK 465

Query: 434 TMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
            +  I+MV  + K+DNG   CGK+GQS PV  G P+  V  LTVGG
Sbjct: 466 ALADITMVATNAKIDNGTWTCGKDGQSCPVTCGMPSALVSKLTVGG 511