Pairwise Alignments

Query, 310 a.a., p-hydroxybenzoic acid efflux system component (NCBI) from Escherichia coli BW25113

Subject, 324 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  197 bits (502), Expect = 2e-55
 Identities = 124/317 (39%), Positives = 179/317 (56%), Gaps = 33/317 (10%)

Query: 5   IRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVH 64
           ++   R  IT  + +LA +  ++ W +Y  SPWTRD R  A+VV IAPDVSG +  + V 
Sbjct: 3   VKSIFRVLITTAIFLLAILLAWSLWQHYMHSPWTRDGRVRAEVVNIAPDVSGQVVALPVR 62

Query: 65  DNQLVKKGQILFTIDQPRYQKALEEAQA---------DVAYYQVLAQE-----KRQEAGR 110
           DNQLVKKG +L  ID  RY  AL++A+A         DV   +V A+      +R +A R
Sbjct: 63  DNQLVKKGDLLMEIDPARYTLALQQAEAAVTARKAELDVRRAEVEARRADLNMRRAQARR 122

Query: 111 RNRLGVQAMSREEIDQANNVLQTVLHQLAKAQA--------------TRDLAKLDLERTV 156
           R  +    +SRE  + A + +     QL  AQA               RD A+L+LERT 
Sbjct: 123 RADVDALVVSREAREDAGSQVTASQAQLEAAQAQLQGAQAQYQAALSQRDTARLNLERTK 182

Query: 157 IRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPL 216
           + +P DG++TNLNV  G++   G+  +A++  +SF+V AY EETKL  +  G RA I  L
Sbjct: 183 VFSPVDGYITNLNVRRGDYAAAGAAKIAVIDSHSFWVYAYFEETKLPLLSIGDRARI-QL 241

Query: 217 GSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWP 276
            +   ++G VDS+A G+ +  + +  +  A ++    WVRLAQR+PVRI+LD   EN+  
Sbjct: 242 INGASMEGHVDSIARGIYDRDNPQSRELTADVNPTFNWVRLAQRIPVRIQLDKVPENVLL 301

Query: 277 A-GTTATVVV---TGKQ 289
           A G T TVV+   +GKQ
Sbjct: 302 ASGLTCTVVLEPGSGKQ 318