Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 485 a.a., D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family from Pseudomonas stutzeri RCH2

 Score =  108 bits (269), Expect = 5e-28
 Identities = 111/430 (25%), Positives = 192/430 (44%), Gaps = 45/430 (10%)

Query: 38  LMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVL 97
           +M+   G +AP    ++     PAST K++T  AAL  LGP+ ++ T     G + +G L
Sbjct: 51  VMLPLTGKAAPTF-INADVSVNPASTMKLVTTYAALELLGPNHQWKTEFYADGPLVDGTL 109

Query: 98  KGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP----- 152
            G+L  + G DP L  + +  ++  L+ +GVN++ G++++D S F      P  P     
Sbjct: 110 NGNLYLKGGGDPKLNMEKLWLLLRDLRANGVNKVTGDLVLDRSHFVQ----PELPVFDDD 165

Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP---VTMFSQVRTLPR 209
             D  + F   P + +V+       + +     D   + +A   P   V + ++V+ LP 
Sbjct: 166 GGDQNKPFLVGPDSLLVNLKALRFIVRN-----DGGKVNIAVEPPIASVRIDNRVQALPA 220

Query: 210 GSAEA--QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267
                  +     V  GD     +TG L           ++ D   YA   ++    + G
Sbjct: 221 AKCPGWPEVLYNPVADGDGVTVVVTGKLAAGCS-AQTYLSLLDHERYAAGAVRAIWAELG 279

Query: 268 ITWSGTLL---RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324
               G++L   R  QV     ++A   S  L ++++ + K S+N +A  +F  +G     
Sbjct: 280 ----GSILGRDRVAQVPSSARLLARAYSPDLTEIIRDINKYSNNTMAKQLFLSLG----- 330

Query: 325 VPGTWRAGSD-----AVRQILRQ---QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376
              T+R  +D     A ++++RQ   + G+   + +I +GSGLSR   ++      +LQ 
Sbjct: 331 --ATFRNEADADDAKAAQRVIRQWLAKKGLISPHLVIENGSGLSRAERVSAREFGNLLQA 388

Query: 377 IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436
             +      FIS +PLA  DG+++ R  L    V GK   KTG+L  V  +AG+     G
Sbjct: 389 AWRSPYAAEFISSMPLAAVDGTMRKR--LRNTPVAGKAHVKTGTLNNVRAIAGYSRDGDG 446

Query: 437 QRMAFVQYLS 446
              A V  L+
Sbjct: 447 NVWAVVAILN 456