Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 488 a.a., Peptidase S13, D-Ala-D-Ala carboxypeptidase C from Pseudomonas syringae pv. syringae B728a

 Score =  120 bits (300), Expect = 1e-31
 Identities = 123/452 (27%), Positives = 208/452 (46%), Gaps = 57/452 (12%)

Query: 28  TQLPAGANLALMVQKVGASAPAID------------YHSQQMALPASTQKVITALAALIQ 75
           T LP     AL   K+G  A ++             +++     PAST K+IT  AAL  
Sbjct: 28  TTLPPKVQQALKASKLGDDALSLVMLPLNGPGTPTVFNADVSVNPASTMKLITTYAALEM 87

Query: 76  LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135
           LGP  ++ T   T G + NGVL+G+L  + G DP L  + +  ++  L+ +GV Q+ G++
Sbjct: 88  LGPTHQWKTEFFTDGTLSNGVLRGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQVTGDL 147

Query: 136 LIDTSIFASHDKAPGWP-----WNDMTQCFSAPPAAAIVD--------RNCFSVSLYSAP 182
           ++D S F      P  P      ND  + F   P A +V+        RN     L S  
Sbjct: 148 VLDRSHFVQ----PQLPVFNDDGNDDNKPFLVKPDALMVNLKALRFVTRNDDGRILVSVE 203

Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242
            P  +A IR+ +    +   Q       + + +Y  +    G +N  T+TG L       
Sbjct: 204 PP--IASIRIDNQVKASASKQC------TGDVRYNPVTQADGSVN-VTVTGQLGNGCNS- 253

Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE-PGT--VVASKQSAPLHDLL 299
               ++ D  +YA   ++   ++ G    GT+  + +V   PG   ++A   S  L +++
Sbjct: 254 QTYLSLLDHPTYAAGAVRAIWQELG----GTIQGKDRVGVLPGNAKLLAKAFSPDLVEVI 309

Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD--AVRQILRQ---QAGVDIGNTIIA 354
           + + K S+N +A  +F  +G    N       G D  A ++++RQ   + G+   + ++ 
Sbjct: 310 RDINKFSNNTMAQQLFLSLGEEFRNEAD----GDDGKAAQRVIRQWLAKKGITAPHLVME 365

Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414
           +GSGLSR   ++   M  +LQ   +      F+S +PLAG DG+++ R  L +  + G+ 
Sbjct: 366 NGSGLSRAERVSAREMAVILQAAWRSPYAAEFMSSMPLAGLDGTMRKR--LKRTPLLGEA 423

Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446
             KTG+L  V  +AGF   ++G   A V  L+
Sbjct: 424 HIKTGTLNTVRAIAGFSRDSNGNTWAVVAILN 455