Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 554 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  214 bits (544), Expect = 8e-60
 Identities = 156/451 (34%), Positives = 233/451 (51%), Gaps = 14/451 (3%)

Query: 26  YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85
           Y+   P   N+A++   +      I  +S++  LPAS QK++ ALAA   LGPDFRF T 
Sbjct: 109 YLAIKPKQTNVAVLAVDLKTQQVIISDNSERAMLPASVQKLLLALAAQHTLGPDFRFHTQ 168

Query: 86  LETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH 145
           L  +G  +  VL+  L   F  DP L   ++  ++ +LK+ GV  I+   L+  S     
Sbjct: 169 LFVQG-FKPPVLER-LYIGFSGDPLLTSAELSALLGSLKQQGVRTINQVYLV--SAVDKS 224

Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205
           DKAPGW W+D+  C+++P A   +D+NC   SL    K GD  ++R+A    +++ +Q+ 
Sbjct: 225 DKAPGWVWDDLGVCYASPVAEFSLDKNCVKASLRPTEK-GDGTYVRLAKDAAISIENQLN 283

Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265
             P  S +     L VV    NR+ L GC   + + LPL+ AV D  ++    +   LK 
Sbjct: 284 YRPGASFKECSPHLSVVGP--NRYLLHGCYSGK-QALPLSIAVTDTDAWLQEKVAGLLKA 340

Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325
           AG   S T  R   +     ++A  QSA +  LL  MLK+SDN+IAD + + +G  +   
Sbjct: 341 AGFN-SHTPKRLHTLPANAHLIADHQSATMDSLLSEMLKESDNLIADALLKQLGKRKGQD 399

Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385
              +  GS  +   L    GVD+ +  + DGSGLSR+NL+    +MQ L  I   +   +
Sbjct: 400 ESDFYQGSKEMAANLTL-LGVDLSSANLVDGSGLSRYNLLNARQLMQTLLLIHHTEAYAS 458

Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYL 445
               LP++G DG+L Y+ G +   +  +V AKTGS+QGV NLAGF+   SG R      L
Sbjct: 459 LKDGLPVSGKDGTLLYKRGFNSLPLKDRVQAKTGSMQGVSNLAGFL--RSGDREYAFVVL 516

Query: 446 SGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476
               VEP  Q  +R P   F + L K + Q+
Sbjct: 517 ENGLVEPESQNGKRKP--GFAATLLKALLQH 545