Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 479 a.a., D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family from Sphingomonas koreensis DSMZ 15582

 Score =  103 bits (257), Expect = 1e-26
 Identities = 113/462 (24%), Positives = 196/462 (42%), Gaps = 49/462 (10%)

Query: 21  ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG--- 77
           + V+  + +   G    L+V  V      +  +  Q  +PAS  K++T  AA + L    
Sbjct: 26  SRVEAELAKAAPGTRFGLVVTDV-QGREIVAVNPDQRFIPASNTKIVTTAAAYMTLPGID 84

Query: 78  -PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL--KKSGVNQIDGN 134
            PD     T+  +G  ++ VL G   AR  +        +  +   +  K   V  I G 
Sbjct: 85  RPDTEGGATVRIEG--QDVVLTGRGDARLSSAADCATDCLSQLADAIAAKTKRVRNITG- 141

Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM-AFIRVA 193
              D ++F     + G  WN++   +    +A  +D N     L +   PG   A   VA
Sbjct: 142 ---DATLFPDERWSSGMSWNNIPSPYGTALSALTLDDN----ELIATATPGKAGATPGVA 194

Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253
               +T+ ++  T+  G        +D +P D +   LTG +   + P  +   + D A 
Sbjct: 195 HLGYLTIDNRAITVAAGGKTD--LNVDRLPFDRS-IRLTGTIAADATPQKIRMGIDDPAH 251

Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNE-----------------PGTVVASKQSAPLH 296
           YA   L   L++ G+  SG +  + +  +                 P   +A+    PL 
Sbjct: 252 YAAWRLATLLRERGVKVSGDIRSRYRTPDTSDDPRQRGAALPPRVTPPAPLAALTPPPLS 311

Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVR-QILRQQAGVDIGNTIIAD 355
           + ++++ K S N+  + + R +G     V GT       V+ + +   AGV   +   +D
Sbjct: 312 EDMRVINKVSQNLHTELLLRRVGL----VKGTGSVADGQVQVEAMFAAAGVPRTSWDFSD 367

Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415
           GSG+S +N IAP  M+++L +I+       +   LP+ G DG+L  R       ++G++ 
Sbjct: 368 GSGMSTYNRIAPRGMVKLLHWISAQSWGAAWRETLPVGGVDGTLARR--FKGTVLEGRIF 425

Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYL----SGYAVEPA 453
           AKTG++     LAG++T  SG+ + F  Y     SG A  PA
Sbjct: 426 AKTGTINATNALAGYLTAKSGKTLTFAAYANDVPSGTAATPA 467