Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 468 a.a., D-alanyl-D-alanine carboxypeptidase from Herbaspirillum seropedicae SmR1

 Score =  131 bits (329), Expect = 6e-35
 Identities = 117/437 (26%), Positives = 194/437 (44%), Gaps = 20/437 (4%)

Query: 27  ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86
           +  +P      L++   G+    +  +  Q   PAS  K++T  AAL  LGP F + T  
Sbjct: 32  VAHIPQQNTGVLVIDTEGSKRVLVSNNIGQPFNPASVMKLVTTDAALEMLGPTFTWKTQA 91

Query: 87  ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146
              G +  GVL GDL+ + G DP L  ++   ++  L+  G+  I GN+++D S FA   
Sbjct: 92  YIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGNLVLDRSYFAPSS 151

Query: 147 KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT 206
             P     D  + ++A P A +++   +    +          + V+   P+  F+   T
Sbjct: 152 YDPAQFDGDPQKPYNAGPDALLLN---YRTQAFRFEPDAASGTVSVSMDPPMAGFTI--T 206

Query: 207 LPRGSAE--AQYCELDVVPGDLNRFTLTG-----CLPQRSEPLPLAFAVQDGASYAGAIL 259
            PR S E    +    ++  D +  T +G     C  +     P   +      Y GA  
Sbjct: 207 PPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMS---NVQYVGASF 263

Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319
                  G  ++G +L   QV     ++   QS  L ++++ + K S+N++A  V   +G
Sbjct: 264 AQMWADLGGRFAGRVL-DGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLG 322

Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379
                 PG     + AVR  L  + G+D     I +G+GLSR   + P  +  VL    +
Sbjct: 323 AEMTGQPGDPVNAARAVRGWLGDK-GIDTNGLAIENGAGLSRIERVTPGLLANVLLQAWR 381

Query: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439
                 F+S LPL GYDG+++ R  L   GV G+   KTG+L  V ++AG++  ASG+  
Sbjct: 382 SPLMPEFVSSLPLVGYDGTMRRR--LKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTY 439

Query: 440 AFVQYLSGYAVEPADQR 456
             V +L  +   P  Q+
Sbjct: 440 VVV-FLINHPAAPNGQK 455