Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 513 a.a., D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq) from Shewanella sp. ANA-3

 Score =  252 bits (644), Expect = 2e-71
 Identities = 154/427 (36%), Positives = 241/427 (56%), Gaps = 8/427 (1%)

Query: 31  PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90
           P  + +AL+ + +  +       +  + +PASTQKV+TA+ AL  LGPDFR+ T L +  
Sbjct: 57  PRHSQVALLARDLSTNTLLYSQQADTLFIPASTQKVLTAVTALATLGPDFRYVTELWSDA 116

Query: 91  NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150
            +  G + G +  RF  DPTL + D++ + A L+K G+  I+G++ +         +APG
Sbjct: 117 PIRQGHIAGSVYLRFSGDPTLTQDDLKALFAHLQKQGITSIEGHLYL-IGDKQEQLQAPG 175

Query: 151 WPWNDMTQCFSAPPAAAIVDRNC-FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209
           W W+D+  CF+AP ++ I+++NC +     S+ K      +R AS + V + S     P+
Sbjct: 176 WVWDDLGICFAAPVSSYIINQNCVYGQFAPSSAKHASEVKLR-ASSFGVKVSSDAIFSPK 234

Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269
              +  +C+LD+V    N++ L GC P  +E +PLA A+ D   +A   L   LK   ++
Sbjct: 235 AGHD--FCQLDLVRLGQNQYHLRGCYPG-NEAIPLAIAISDPEKFAMDTLTATLK-GEMS 290

Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329
            SG +     +     ++AS  SAPL +LLK ML KSDN+IAD++F+ +G + +   G++
Sbjct: 291 LSGKVKIGNAIPSKAKLIASHSSAPLPELLKTMLLKSDNLIADSLFKRVGQSYYKAQGSF 350

Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389
             G+ A+R IL +  G+D+ N  I DGSGLSR+NL++   +  VL  I Q     + I  
Sbjct: 351 THGAAAMRHILTE-LGIDLTNANIVDGSGLSRYNLLSAKQLADVLALIYQDARFHSLIDS 409

Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449
           LP AG  G+LQYR G  +  +  +V AKTGS+QGV NLAGF+  A  + + FV   +G +
Sbjct: 410 LPEAGVSGTLQYRLGYTKPPLKHRVFAKTGSMQGVANLAGFMRLAQQRDILFVVLENGIS 469

Query: 450 VEPADQR 456
            E   QR
Sbjct: 470 PETKKQR 476