Pairwise Alignments

Query, 331 a.a., predicted peptidase (collagenase-like) (NCBI) from Escherichia coli BW25113

Subject, 333 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  414 bits (1065), Expect = e-120
 Identities = 208/333 (62%), Positives = 253/333 (75%), Gaps = 2/333 (0%)

Query: 1   MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK 60
           MELLCPAGNL +LK+A++ GADAVY+GLKDDTNAR FAGLNFT  KLQEA    HQ  +K
Sbjct: 1   MELLCPAGNLASLKSALQAGADAVYLGLKDDTNARSFAGLNFTPAKLQEAAELTHQRGKK 60

Query: 61  LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA 120
           + + +NTF  P+   RW +A+D+AA++G DALI+ADL++L+YA  +YPHI  H+SVQASA
Sbjct: 61  IFLTLNTFPKPNEEHRWYQAIDLAAKIGVDALIVADLSLLDYAHRQYPHIPLHLSVQASA 120

Query: 121 TNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSS 180
           TN  A++FY   F+V+RVVLPRVLS+ QV+ LA+V+PV LEVFAFGSLCIM+EGRC+LSS
Sbjct: 121 TNLGALSFYKEAFNVSRVVLPRVLSMKQVRDLAKVSPVDLEVFAFGSLCIMAEGRCHLSS 180

Query: 181 YLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLV-- 238
           Y+TG+SPNT G+CSPA+ VRWQ+  Q   + LNEVLID+    E  GYP +CKGRYL   
Sbjct: 181 YVTGQSPNTGGSCSPAKHVRWQEQGQDRLTWLNEVLIDKSGLDEQMGYPVVCKGRYLTQE 240

Query: 239 DGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAD 298
           D +  + LE PTSLNTL LLPEL  A I S+KIEGRQRSPAYV QV KVWRQAID     
Sbjct: 241 DDKPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTKVWRQAIDTYLNH 300

Query: 299 PQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ 331
           P  F  Q+ W + L  +SEG  TTLGAY R WQ
Sbjct: 301 PDKFQTQAHWEQALAKVSEGQITTLGAYERNWQ 333