Pairwise Alignments

Query, 346 a.a., predicted permease (NCBI) from Escherichia coli BW25113

Subject, 330 a.a., permease (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 14/250 (5%)

Query: 105 GQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFM 164
           G+    G +L  L  +    C+C A P+  G     V +G   +F +  P++N   +V +
Sbjct: 78  GRGEAVGNVLAALLGIVTPFCSCSAVPLFIGFVSAGVPLGVTFSFLVSAPMINEIAVVML 137

Query: 165 GFVLGWGFAAIRLVAGLVMVLLIATL---------VQKWVRETPQTQAPVEIDIPEAQGG 215
             +LGW  AA+    GL + ++   +         ++ WV +  + +A    D   +  G
Sbjct: 138 YGLLGWKVAALYAGTGLAIAIVSGWIIGRLGMERHIEGWVLQV-RAEAEQMHDAGLSWSG 196

Query: 216 FFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGA--VDNSLMWVVAMAVA-GC 272
                 +A+  +     P  +L + V GA      P    A  +     W V +AVA G 
Sbjct: 197 RIDYGVQAMRDIVGKVWPWVVLGIAV-GAGIHGYVPEGFMASIMGRGAWWAVPLAVAIGI 255

Query: 273 LFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMV 332
                 A  IP+VQ ++  G      LA +M + A+SLP  +MLR+    + + +   +V
Sbjct: 256 PMYSNAAGMIPVVQALLGKGAALGTVLAFMMAVIALSLPEAVMLRRVLKPRLVAVFFGVV 315

Query: 333 AVSGVIVGGL 342
            +  ++VG L
Sbjct: 316 GLGIMLVGYL 325



 Score = 35.8 bits (81), Expect = 2e-06
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 5/129 (3%)

Query: 63  WQAALDYAMIYFL----AVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLF 118
           W   +DY +         VW   VLG+ +G+ I   +P  ++   +G+  +    L    
Sbjct: 194 WSGRIDYGVQAMRDIVGKVWPWVVLGIAVGAGIHGYVPEGFMASIMGRGAWWAVPLAVAI 253

Query: 119 SLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRL- 177
            +P         PV   +  +  ++G  LAF M    L+    V +  VL     A+   
Sbjct: 254 GIPMYSNAAGMIPVVQALLGKGAALGTVLAFMMAVIALSLPEAVMLRRVLKPRLVAVFFG 313

Query: 178 VAGLVMVLL 186
           V GL ++L+
Sbjct: 314 VVGLGIMLV 322