Pairwise Alignments

Query, 346 a.a., predicted permease (NCBI) from Escherichia coli BW25113

Subject, 497 a.a., permease (RefSeq) from Shewanella sp. ANA-3

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)

Query: 82  VLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQV 141
           +LG+IL  L++V +P  W+ + LG   F+  +   L   P  +C+C   P A G+RR   
Sbjct: 18  LLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGA 77

Query: 142 SMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQT 201
           S     +F +  P     ++     +LG   A +R +A +   ++   LV +   +  + 
Sbjct: 78  SKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGR-DDDDGKP 136

Query: 202 QAPVEIDIPEAQGG 215
            A  E  + +AQ G
Sbjct: 137 AAKAEAQLDKAQSG 150



 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)

Query: 52  KSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRG 111
           +S++A+       AA D  ++    +W   ++G+   +L+Q  +P D+L +         
Sbjct: 306 ESVIARIGLGLKYAATD--LVRDTTLW--LLVGLFFAALVQTYVPADFLAKW--GDGLLA 359

Query: 112 TLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLG-- 169
            L+  L S+P  +C   + P+AAG+    VS G  L F M  P  N ATL  +   LG  
Sbjct: 360 MLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKR 419

Query: 170 ------WGFAAIRLVAGLVMVLLIA 188
                  G   + LVAG ++  L+A
Sbjct: 420 ALYGYLGGVLGVALVAGALVNYLVA 444