Pairwise Alignments

Query, 219 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 216 a.a., SNARE associated Golgi protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (260), Expect = 1e-27
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 11/194 (5%)

Query: 16  FAALADPHIVSVV-------YFVMFATLFLENGLLPASFLPGDSLLILAGALIAQGVMDF 68
           F    D H+  +V       Y ++F  +F E GL+   FLPGDSLL  AG +   G +++
Sbjct: 13  FLLHVDRHLFELVSNWGVYTYAILFLVVFCETGLVVTPFLPGDSLLFAAGTIAGAGHLEY 72

Query: 69  LPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDRHGLLALLA 128
            P    L AAA +G  ++Y  GR++G     + +   L  ++  RA   ++RHG  A++ 
Sbjct: 73  FPLAFTLLAAAIIGDAVNYRIGRYVGPPVFERNYRL-LNRQHLYRAHEFYERHGGKAIVL 131

Query: 129 GRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPFVKRHEDQV 188
            RF+  VRT  P +AG++ +  RRF  FN    ++WV ++ + GY L  +P V+R+   V
Sbjct: 132 ARFVPVVRTFAPFVAGVAAMDARRFLLFNASGAVVWVGLLVTAGYFLGNMPVVQRNFSLV 191

Query: 189 ---MTFLMILPIAL 199
              +  + +LPI L
Sbjct: 192 IYGIIVVSVLPIVL 205