Pairwise Alignments

Query, 338 a.a., IS5 transposase and trans-activator (NCBI) from Escherichia coli BW25113

Subject, 256 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  213 bits (542), Expect = 4e-60
 Identities = 119/242 (49%), Positives = 155/242 (64%), Gaps = 2/242 (0%)

Query: 84  LSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAE 143
           LSD AME+AL+EI ++R FA+L     +PD TTI+NFR LLE H LA + +K  +   A+
Sbjct: 2   LSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARCWKRSSASGAQ 61

Query: 144 AGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTH 203
            G     G           SSTKN +  RDPEMHQTKKGNQW+FGMKAHIGVD  SGL H
Sbjct: 62  -GPEPAVGHDRRCDADRGASSTKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVH 120

Query: 204 SLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTL 263
            +  TAAN  D+     LLHG+E  V  D+GY GA +REEL + +  + IA +   ++ +
Sbjct: 121 HVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFIAAKRSVLQAI 180

Query: 264 KQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLAN 323
             + R+       E+ KAS+RA+VEHPFR+IKRQFG+ K RY+GL KN  Q+  LF L+N
Sbjct: 181 -GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSN 239

Query: 324 LF 325
           L+
Sbjct: 240 LW 241