Pairwise Alignments

Query, 338 a.a., IS5 transposase and trans-activator (NCBI) from Escherichia coli BW25113

Subject, 267 a.a., IS5 family transposase from Rhodopseudomonas palustris CGA009

 Score =  119 bits (299), Expect = 7e-32
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 12/217 (5%)

Query: 37  LSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEI 96
           L R+  ++ W  +  +I    P    GR PY    M +   +Q WY LSD  +E+AL + 
Sbjct: 21  LERISGLIDWGRLAVLIRKVRP-GETGRPPYEPLAMFKALLLQQWYGLSDPGLEEALLDR 79

Query: 97  ASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDA 156
            S R F   +LD+  PD TT+  FR+ L+Q  L   LF+ + R L  AG ++  GTL+DA
Sbjct: 80  VSFRRFCGFALDAQTPDETTLCRFRNALQQAGLGDALFQEVLRQLEAAGYVLKTGTLIDA 139

Query: 157 TIIE------APSSTKNKEQQR---DPEMHQTK--KGNQWHFGMKAHIGVDAKSGLTHSL 205
           T+++      A  ST  + + R   DP+ + T+   G +  FG KAHI +D  SGL  + 
Sbjct: 140 TLVQSSGRTLASGSTPREIESRSSHDPQANWTRHGAGRRLFFGYKAHIAIDQGSGLIRAR 199

Query: 206 VTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQRE 242
             T A  ++     +L+ G+E+ V AD  Y+   +R+
Sbjct: 200 KLTGAKTYESEVAEDLVLGDEKAVYADKAYEKRARRQ 236