Pairwise Alignments

Query, 338 a.a., IS5 transposase and trans-activator (NCBI) from Escherichia coli BW25113

Subject, 326 a.a., transposase, IS4 family protein (RefSeq) from Shewanella loihica PV-4

 Score =  553 bits (1425), Expect = e-162
 Identities = 265/325 (81%), Positives = 297/325 (91%)

Query: 13  MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETM 72
           MS QLTFADSEFSSKRRQTRKEIFLSRME +LPW  +++VIEPFYPK GNGRRPYPLETM
Sbjct: 1   MSQQLTFADSEFSSKRRQTRKEIFLSRMENLLPWSQLLDVIEPFYPKVGNGRRPYPLETM 60

Query: 73  LRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQ 132
            RIHCMQ WY+LSD A EDALYEIASMR FA LSLD A+PDRTTIMNFRHLLE+H+L R+
Sbjct: 61  FRIHCMQQWYSLSDEATEDALYEIASMRQFALLSLDKAIPDRTTIMNFRHLLEKHKLTRK 120

Query: 133 LFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAH 192
           LFKT+N+WL+++GVMMTQGTLVDATIIEAPSSTKNK  +RDP+MHQTKKGNQWHFGMKA+
Sbjct: 121 LFKTVNQWLSDSGVMMTQGTLVDATIIEAPSSTKNKNNERDPDMHQTKKGNQWHFGMKAY 180

Query: 193 IGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWL 252
           IGVDAKSGLTH+LVTTAANEHDLNQL NLLHGEE+FVS DAGYQGA +REEL + +V+WL
Sbjct: 181 IGVDAKSGLTHTLVTTAANEHDLNQLDNLLHGEEEFVSGDAGYQGAQKREELKDTNVEWL 240

Query: 253 IAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKND 312
           IAERPGK+R LK+ PRKNKT INIEY+KASIRA+VEHPFRIIK QFGF+KARYKGL+KND
Sbjct: 241 IAERPGKIRALKKRPRKNKTIINIEYLKASIRAKVEHPFRIIKCQFGFIKARYKGLMKND 300

Query: 313 NQLAMLFTLANLFRADQMIRQWERS 337
           +QLAMLFTLANLF  DQM+R+  RS
Sbjct: 301 SQLAMLFTLANLFTVDQMLRRQPRS 325