Pairwise Alignments

Query, 418 a.a., transport of nucleosides, permease protein (VIMSS) from Escherichia coli BW25113

Subject, 416 a.a., xanthosine permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  452 bits (1162), Expect = e-131
 Identities = 224/413 (54%), Positives = 298/413 (72%), Gaps = 7/413 (1%)

Query: 1   MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPALLGI 60
           M++K++L I++FLQF +WGSWL +LG YM   L F+G  IGA+++++GIA++ MP ++GI
Sbjct: 1   MSIKVRLIIMNFLQFFVWGSWLISLGGYMGRELHFEGGQIGAIFATMGIASLVMPGIIGI 60

Query: 61  VADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILINSFAYMPTLGLINTISYYR 120
           +ADKW +A+ +Y +CH  GA  LF A+ VT  + M+  +L+N   YMPTL L NT+SY  
Sbjct: 61  IADKWFNAERLYGLCHIAGAACLFYASTVTNYDQMYWAMLLNLLVYMPTLSLANTVSYNA 120

Query: 121 LQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHMQLYIGAALSAILVLFTLTLP 180
           L+    D++ DFPPIR+WGTIGFI AMW V L+GF+ S  QLY+G A + +L L++ TLP
Sbjct: 121 LEQYKCDLIKDFPPIRVWGTIGFICAMWAVDLTGFKNSSAQLYVGGASALLLGLYSFTLP 180

Query: 181 HIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDK 240
               AK +  ++  +  GLDAF LFK K+MAIFF+FSMLLGA LQITN +G+ FL SF  
Sbjct: 181 ACKPAKTE-KKTLLSSFGLDAFVLFKRKKMAIFFLFSMLLGAALQITNTYGDLFLGSFAS 239

Query: 241 DPMFASSFIVQHASIIMSISQISETLFILTIPFFLSRYGIKNVMMISIVAWILRFALFAY 300
            P FA SF V+H+ I++SISQ+SETLFIL IPFFL  +GIK VM+IS+ AW+ RF LF +
Sbjct: 240 IPEFADSFGVKHSVILLSISQMSETLFILAIPFFLRHFGIKQVMLISMFAWVFRFGLFGF 299

Query: 301 GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVSPAIRASAQGMFLMMTNGFGCIL 360
           GDP   G  +L+LSMIVYG AFDFFNISGS+FVE+E S +IRASAQG+F MMTNG G I+
Sbjct: 300 GDPGS-GLWMLILSMIVYGMAFDFFNISGSLFVEQETSSSIRASAQGLFFMMTNGLGAII 358

Query: 361 GGIVSGKVVE---MYTQNGIT--DWQTVWLIFAGYSVVLAFAFMAMFKYKHVR 408
           GG  SG VV+   +Y    +   +W  +W IFA Y++V+   F  +FKYKH R
Sbjct: 359 GGYASGAVVDAFSVYADGKLVSREWPDIWFIFAAYALVIGILFALVFKYKHQR 411