Pairwise Alignments

Query, 464 a.a., galactose:H+ symporter (galP) (from data) from Escherichia coli BW25113

Subject, 484 a.a., D-xylose-proton symporter (D-xylose transporter) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  206 bits (525), Expect = 1e-57
 Identities = 153/492 (31%), Positives = 240/492 (48%), Gaps = 63/492 (12%)

Query: 11  NKAMTFFVCFLAALAGLLFGLDIGVIAGALPFI------ADEFQITSHTQEWVVSSMMFG 64
           +K   + +  +A L GLLFG D  VI+GA   +      A +FQ          SS + G
Sbjct: 9   SKLYLYSITSVAILGGLLFGYDTAVISGAEKGLEAFFLSASDFQYNKVMHGITSSSALIG 68

Query: 65  AAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSL---------FSAAAPNVEVLI---LSR 112
             +G   SG  + +LGR+ SL + A+LF   +L         F    PN+++LI   L R
Sbjct: 69  CVLGGALSGVFASRLGRRNSLRLAAVLFFLSALGSYYPEVLFFEYGKPNMDLLIAFNLYR 128

Query: 113 VLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAY-------------- 158
           VL G+ VG+AS   P+Y++EIAP  IRG+++S  Q  I  G+L  Y              
Sbjct: 129 VLGGIGVGLASAVCPMYIAEIAPSNIRGTLVSCNQFAIIFGMLVVYFVNYLIMGDHQNPI 188

Query: 159 -LSDTA-----------FSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVD 206
            L D A           ++    WR+M G    PA    + +FF+P +PR+    ++   
Sbjct: 189 ILKDAAGVLSVSAESDMWTVQEGWRYMFGSEAFPAAFFGLLLFFVPKTPRYLVLVQQEEK 248

Query: 207 AERVLLRLRDTSAEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTG 266
           A  +L ++ +   +A+  L++I+ + Q K     LF         + +G+LL V QQ  G
Sbjct: 249 AYTILEKI-NGKKKAQEILNDIKATAQEKTE--KLFTYGVT---VIVIGILLSVFQQAIG 302

Query: 267 MNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLV 326
           +N ++YYAP+IFE AG       M  TVI+G+ N++ T +AI  VDR+GRKP L +G + 
Sbjct: 303 INAVLYYAPRIFENAGAEG--GGMMQTVIMGIVNIIFTLVAIFTVDRFGRKPLLIIGSIG 360

Query: 327 MAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFG 386
           MA G   +     + I         +  ++++   F MS GP+ WVL SEI P   R   
Sbjct: 361 MAVGAFAVAMCDSMAIKG----VLPVLSIIVYAAFFMMSWGPICWVLISEIFPNTIRGKA 416

Query: 387 ITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWL---VPETKHVS 443
           +  + A  WI N IV +TF      L + +  + Y+   ++ +   +++   VPETK  +
Sbjct: 417 VAIAVAFQWIFNYIVSSTF----PALYDFSPMFAYSLYGIICVAAAIFVWRWVPETKGKT 472

Query: 444 LEHIERNLMKGR 455
           LE + +   K +
Sbjct: 473 LEDMSKLWKKNK 484