Pairwise Alignments

Query, 464 a.a., galactose:H+ symporter (galP) (from data) from Escherichia coli BW25113

Subject, 468 a.a., arabinose-proton symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  268 bits (684), Expect = 4e-76
 Identities = 157/458 (34%), Positives = 254/458 (55%), Gaps = 21/458 (4%)

Query: 11  NKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAV 70
           N     F+  +AAL G LFG D  VI+G +  +   FQ+ +  Q W V   + G+ VG +
Sbjct: 6   NFGYLIFLSVVAALGGFLFGYDTAVISGTIAQVTQLFQLDTLQQGWYVGCALIGSIVGVL 65

Query: 71  GSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYL 130
            +G LS KLGRK +++I A LF   +L  A + +   L++ R++ G+ +GV S  +PLY+
Sbjct: 66  FAGILSDKLGRKMTMIISATLFSTSALGCAISADFTQLVVYRIIGGVGIGVVSIVSPLYI 125

Query: 131 SEIAPEKIRGSMISMYQLMITIGILGAYLSD---TAFSYTG---------------AWRW 172
           SE+A  + RG ++S+YQL +T+G LGAYL +    A++ +G                WR 
Sbjct: 126 SEVAVAQYRGRLVSLYQLAVTVGFLGAYLINYQLLAYAESGNQLSMDWLNKIFVTEVWRG 185

Query: 173 MLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESL 232
           MLG+  +PA+L  I +FF+P+SPRW   + +   A  +L R+ ++ +EA  +L E +  L
Sbjct: 186 MLGMETLPAVLFFIIIFFIPESPRWLIVRGKEEKAVNILERIYNSVSEAASQLKETKSVL 245

Query: 233 QVK-QSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMW 291
             + +S WA+  +   F +AV +GV + ++ QF G+N ++YY P IFE AG +   + ++
Sbjct: 246 TSETKSEWAMLMKPGIF-KAVIIGVCIAILGQFMGVNAVLYYGPSIFENAGLSG-GDSLF 303

Query: 292 GTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFA 351
             V+VGL N L T +A+ ++DR GRK  +  G   M   + ++G     G     +  F 
Sbjct: 304 YQVLVGLVNTLTTVLALVIIDRVGRKQLVYYGVSGMVVSLLLIGVYFLFGDSWGVSSLFL 363

Query: 352 IAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNT 411
           +   L ++   A+S   +++VL SE+ P K R   ++ +    WI   ++G     ML  
Sbjct: 364 LVFFLFYVFCCAVSICAVVFVLLSEMYPTKVRGLAMSIAGFALWIGTYLIGQLTPWMLQN 423

Query: 412 LGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIER 449
           L  A TF+++A + V ++L+   LVPET   SLE IER
Sbjct: 424 LTPAGTFFLFAVMCVPYMLIVWKLVPETTGKSLEEIER 461