Pairwise Alignments

Query, 592 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 448 a.a., ATPase AAA from Herbaspirillum seropedicae SmR1

 Score =  247 bits (631), Expect = 6e-70
 Identities = 143/332 (43%), Positives = 208/332 (62%), Gaps = 12/332 (3%)

Query: 257 SFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKL 316
           S   A +P      QLVGE   MRQ+ + I R A S ++V+V+GE+GTGKE+VARA+H+ 
Sbjct: 121 STPAAASPATEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELVARALHRN 180

Query: 317 SGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGD 376
             R  +PF+A+NCAAIP +L+ESELFG+VKGAF+GA++  + G  Q A+ GTLFLDEIGD
Sbjct: 181 GARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSP-RLGRFQEADGGTLFLDEIGD 239

Query: 377 MPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNV 436
           M L  QAK+LR ++ RE+ P+G +  ++VD+R+I+AT+++L   I +G+FREDL+YRL V
Sbjct: 240 MELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDLWYRLQV 299

Query: 437 IPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYP-GIAPDVVEILRKHRWPGNLRELSN 495
           + I +P LRER  DI  +  +FL    R+LG   P  I+P    +L +H WPGN+REL N
Sbjct: 300 LTIMVPALRERPGDILTIAEHFL----RQLGGDAPKRISPAAARLLLQHAWPGNVRELRN 355

Query: 496 LMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQM 555
            ME    V+  G  I++     ++  +        +  S   +  D     AL E+E+ M
Sbjct: 356 TMERAA-VMSHGLCIEA----EDIGLSARPPAGAASAASAPAIDWDGPLAVALAEVERVM 410

Query: 556 IREAL-SRHNSKKQVADELGIGIATLYRKIKK 586
           I  AL     ++ + A  LGI    LYR++++
Sbjct: 411 IERALQGAAGNRAEAARRLGISRQQLYRRLEE 442