Pairwise Alignments

Query, 592 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 458 a.a., DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains from Paraburkholderia bryophila 376MFSha3.1

 Score =  245 bits (625), Expect = 3e-69
 Identities = 147/336 (43%), Positives = 205/336 (61%), Gaps = 14/336 (4%)

Query: 250 AFHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVV 309
           A + SH  FS  +A  +P   +L+G    +R++++ I R A S ++V+  GE+GTGKEV 
Sbjct: 130 AANASHP-FSAESAGAKP---RLLGVSETLREVQKQIGRAASSEATVLFTGETGTGKEVA 185

Query: 310 ARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTL 369
           AR +H  S R  KPF+A+NCAAIP +LLESELFG+VKGAFTGA+A+ + G   AA+ GTL
Sbjct: 186 ARVLHDASRRSGKPFVAVNCAAIPAELLESELFGHVKGAFTGATAD-RPGCFAAADGGTL 244

Query: 370 FLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFRED 429
            LDEIGDMPL +QAKLLR I+ R+I P+G++  I VDIR+++AT++NL   +  G+FRED
Sbjct: 245 LLDEIGDMPLPMQAKLLRVIQERQITPLGSNRVIPVDIRLVAATHRNLQTMVEAGEFRED 304

Query: 430 LFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGN 489
           L YRLN+IPI LPPLRER  DI  L  +FL     +  S    ++     +L  + WPGN
Sbjct: 305 LLYRLNIIPIALPPLRERLADILPLAEHFL-AEVAKARSRELRLSLPAQHLLVGYAWPGN 363

Query: 490 LRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALE 549
           +REL N +E    + P   +    L     LN        +       ++L D    A+E
Sbjct: 364 VRELRNAVERAGALAPGAMITAEDL---GFLNGKPDLGEPLVGTGLLEMTLPD----AVE 416

Query: 550 EMEKQMIREALS-RHNSKKQVADELGIGIATLYRKI 584
            +E+ +I  AL+   N++   A  LGI   TLY K+
Sbjct: 417 TLERALISHALTLASNNRADAARRLGISRQTLYAKL 452