Pairwise Alignments

Query, 301 a.a., IS2 insertion element transposase InsAB' (NCBI) from Escherichia coli BW25113

Subject, 278 a.a., Integrase, catalytic region from Pseudomonas syringae pv. syringae B728a

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 60/233 (25%), Positives = 92/233 (39%), Gaps = 20/233 (8%)

Query: 66  YGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVA---- 121
           YGYRR+ A LRR   L     +N K V ++M Q  L    +     S +  TG+ A    
Sbjct: 54  YGYRRITAALRRAGHL-----VNHKTVQKLMGQLGLKSLIRVKKYRSYKGETGKAAPNLL 108

Query: 122 -----VKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVM 176
                 +  NQ+W +D  EF    G++L ++  +D    E + +A+      S  + D M
Sbjct: 109 KRDFKAQYLNQKWATDVTEFKV-GGQKLYLSPIMDLYSGEIISYAIARRPLYS--MVDEM 165

Query: 177 LGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESF 236
           L    +R G   P       +D G  YR    ++      +    +   +   N   ESF
Sbjct: 166 LEGAFKRLG---PHEKPILHSDQGWQYRMPIYQRLLNENSIAASMSRKGNCYDNAAIESF 222

Query: 237 VKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRA 289
             T+K ++  +    D       + E  E+YN       L   SP EY  Q A
Sbjct: 223 FSTLKSEFFYLNKFNDLDELQAGIEEYIEYYNHSRIKLKLNGLSPVEYRMQAA 275