Pairwise Alignments

Query, 301 a.a., IS2 insertion element transposase InsAB' (NCBI) from Escherichia coli BW25113

Subject, 280 a.a., ISDvu2, transposase OrfB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  245 bits (625), Expect = 1e-69
 Identities = 136/278 (48%), Positives = 167/278 (60%), Gaps = 6/278 (2%)

Query: 17  VSRCLRVSRAQLHVILRRTDDWMDGRRSRHT--DDTDVLLRIHHVIGELPTYGYRRVWAL 74
           V+  L+VSR++L     R D     R+ R+    D ++L  I  ++ E  TYGYRR+ A 
Sbjct: 4   VADSLQVSRSRL---AERLDGPHRTRKPRYVKAQDEELLRLIRAILDERQTYGYRRIQAC 60

Query: 75  LRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGF 134
           L       G   +N KRVYRIMR N LLL R     P K AH G++     N RWCSDGF
Sbjct: 61  LNAHLRATGQSEVNHKRVYRIMRMNGLLLTRHNGKRPDK-AHEGKIVTLHRNTRWCSDGF 119

Query: 135 EFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVE 194
           E  CDN E +RV F LD CDRE + +  TT G +   V+D+ML +VERRFGN   S  VE
Sbjct: 120 EIPCDNREVVRVAFVLDSCDREVISYVATTRGISGSMVRDLMLESVERRFGNAHTSHTVE 179

Query: 195 WLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGL 254
           WL+DNGSCY A ET +FA  LGL    T VRSPESNG+AE+FVKT KRDY+     PD  
Sbjct: 180 WLSDNGSCYTAKETVEFASWLGLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPDAP 239

Query: 255 TAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNG 292
           +  K L+E FE YNE  PH  L  RSPR+++R  A  G
Sbjct: 240 SVLKRLSEWFEDYNENAPHKGLRMRSPRQFIRLSATAG 277