Pairwise Alignments

Query, 301 a.a., IS2 insertion element transposase InsAB' (NCBI) from Escherichia coli BW25113

Subject, 285 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 53.1 bits (126), Expect = 7e-12
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 23/217 (10%)

Query: 87  INAKRVYRIMRQNALLLERKPAVPPSKRA-HTGRVA---------VKESNQRWCSDGFEF 136
           +  +RV R+MR N + +ER      +  + HT  +A             NQ+W  D   +
Sbjct: 78  VGHRRVGRLMRANGITVERTRKFKATTDSDHTFNIAPNLLNRDFSAAGPNQKWAGD-ISY 136

Query: 137 CCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWL 196
                  L ++  LD   R  + WAV+     +   +D+ + A++       P     + 
Sbjct: 137 IWTREGWLYLSVILDLHSRRVIGWAVS-----NRMKRDLAIRALKMAIAFRSPPKGCIFH 191

Query: 197 TDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTA 256
           +D GS Y +++ ++  R  G     +   +   N   E+F KTIK + I    +    T 
Sbjct: 192 SDRGSQYCSHDYQKILRQHGFRASMSGKGNCYDNAAVETFFKTIKAELIW---RRSWATR 248

Query: 257 AKNLAEAFEH----YNEWHPHSALGYRSPREYLRQRA 289
            +     FE+    YN    HSALG++SP  + R+ A
Sbjct: 249 RQAEMAIFEYINGFYNPRRRHSALGWKSPVAFERKVA 285