Pairwise Alignments

Query, 301 a.a., IS2 insertion element transposase InsAB' (NCBI) from Escherichia coli BW25113

Subject, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 13/256 (5%)

Query: 42  RRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNAL 101
           RRS+   DT++ +R+  +  E   +GYRR+  LL+R+        +N K++YR+ R   L
Sbjct: 28  RRSKRLADTELRVRMKELASERRRFGYRRLHMLLKREGW-----EVNWKKLYRLYRDEGL 82

Query: 102 LLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWA 161
            + ++     +    T     +  NQRW  D      ++G R RV   +D   RE L   
Sbjct: 83  TVRKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFSRECLAAV 142

Query: 162 VTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKN 221
           V T    +   +++   A       +L   P   ++DNG+   +N   ++     ++   
Sbjct: 143 VDTSISGARVARELDRIA-------ELRGYPCLVVSDNGTELTSNAMLKWQEDRKVDWHY 195

Query: 222 TAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSP 281
            A   P  NG+ ESF   ++ + ++    P    A + +A   + YN   PHS+L   +P
Sbjct: 196 IAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHACRMIAAWRDDYNHHRPHSSLDGLTP 255

Query: 282 REYLRQRACNGLSDNR 297
           REY  QR+    + NR
Sbjct: 256 REY-HQRSREDQTLNR 270