Pairwise Alignments

Query, 237 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 250 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  238 bits (606), Expect = 1e-67
 Identities = 125/239 (52%), Positives = 172/239 (71%), Gaps = 5/239 (2%)

Query: 2   LFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRL 61
           L   + DP AW AL TL ++EIVLGIDN+IF+S++  KLP AQRA  +R+G+  A+VMRL
Sbjct: 4   LLTLVADPAAWAALLTLVVMEIVLGIDNLIFISILSNKLPEAQRARTQRIGIMLALVMRL 63

Query: 62  ALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESI-EGEEEGLK- 119
            LL ++AW+ +LT P  T+F+   S RDLILL GGLFL+WKA++EIH  +   EEE  K 
Sbjct: 64  GLLGTVAWIAQLTAPAITLFAHAFSWRDLILLGGGLFLVWKATREIHHHVTHAEEERSKA 123

Query: 120 --TRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGD 177
             T   +   AI QI++LD++FS+DS+ITAVG+++H+ IM  AV+ AV  M+FAAR +  
Sbjct: 124 GSTVQLTVAAAIGQILVLDMVFSVDSIITAVGMTEHMPIMFVAVISAVLAMLFAARPLSR 183

Query: 178 FVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN-LIRNKKN 235
           F++R+P++  LALSFL+++G TLI E F  HVPK YIY AM FS  VE++N L+R  K+
Sbjct: 184 FIDRNPTIVTLALSFLLVIGMTLIAEGFGSHVPKAYIYVAMAFSAFVEAMNMLVRRAKS 242