Pairwise Alignments

Query, 608 a.a., exonuclease V (RecBCD complex), alpha chain (NCBI) from Escherichia coli BW25113

Subject, 1539 a.a., TraA1 conjugal transfer protein from Sinorhizobium meliloti 1021

 Score = 70.1 bits (170), Expect = 7e-16
 Identities = 115/440 (26%), Positives = 172/440 (39%), Gaps = 73/440 (16%)

Query: 154 QKVAAAVALTR--RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAAR 211
           ++V A   +TR   I+ + G  G GK+T    LLAA     +GE  R+  AA  GKAA  
Sbjct: 394 EQVDAVRHVTRDNAIAAVVGLAGAGKST----LLAAARAAWEGEGRRVIGAALAGKAAEG 449

Query: 212 LTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEA 271
           L +S G   R L   +                L  + G ++L          DVLV+DEA
Sbjct: 450 LEDSSGIRSRTLASWE----------------LAWENGREQLNRG-------DVLVIDEA 486

Query: 272 SMIDLPMMSRLIDALPD-HARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLS 330
            M+    M+R++ A+ D  A+ + +GD  QL  +EAGA                  R +S
Sbjct: 487 GMVSSQQMARVLKAVEDAGAKAVLVGDAMQLQPIEAGAAF----------------RAIS 530

Query: 331 RLTGTHVPAGTGTEA-ASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQD 389
              G    AG   +  A  RD+  L  +           Q    +    +  +      D
Sbjct: 531 ERIGFAELAGVRRQRDAWARDASRLFARGKVEEGLDAYAQQGRIVETETRAEIVDRIVAD 590

Query: 390 FTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPF 449
           + D  + LLQ   D        L G     D L   A  +  ++  NE      + EG  
Sbjct: 591 WADARRDLLQKSAD--GEHPGRLRG-----DELLVLAHTNDDVRKLNEALRNVMIGEG-- 641

Query: 450 GVAGLNE-----RIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIAL-- 502
            +AG  E      + +F    R I    ++R+ E R    AR      + NG +G  +  
Sbjct: 642 ALAGAREFQTARGLREFAAGDRIIFLE-NARFVEPR----ARRLGPQYVKNGMLGTIVST 696

Query: 503 -DRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVV 561
            DR   T +   +  G    +        +  +A T+HKSQGS  D   ++     T ++
Sbjct: 697 GDRRGDTLLSVRLDSGRDVVISQDSYRNVDHGYAATIHKSQGSTVDRTFVL----ATGMM 752

Query: 562 TRELVYTAVTRARRRLSLYA 581
            + L Y A+TR R R  LYA
Sbjct: 753 DQHLTYVAMTRHRDRADLYA 772