Pairwise Alignments

Query, 429 a.a., predicted serine transporter (NCBI) from Escherichia coli BW25113

Subject, 438 a.a., amino acid transporter, transmembrane (RefSeq) from Shewanella amazonensis SB2B

 Score =  466 bits (1200), Expect = e-136
 Identities = 230/418 (55%), Positives = 307/418 (73%), Gaps = 6/418 (1%)

Query: 10  ASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHR 69
           A+ ++   W   DT WML L+GTA+GAG+LFLPINAG+GG  PL++MA+L  PMT+ AHR
Sbjct: 25  ATPNNAMPWTAQDTTWMLSLFGTAVGAGILFLPINAGMGGFWPLVVMALLIGPMTYLAHR 84

Query: 70  GLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMS 129
           GL+RFV S    G DIT+VVEEHFG GAGK IT+LYFFAIYPI+L+Y V ITN V+SFM 
Sbjct: 85  GLSRFVCSSSIAGSDITQVVEEHFGKGAGKAITVLYFFAIYPIVLIYGVGITNVVDSFMV 144

Query: 130 HQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNG 189
           +QLG+   PR +LS +LI+GMM+++  GE++++K    LV+P V +L  ++LYL+P WN 
Sbjct: 145 NQLGLESLPRWLLSGVLILGMMSVMVAGEKIMLKVTQFLVYPLVAILAFMSLYLMPNWNL 204

Query: 190 AALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSK 249
           AA++ +      A G+ L  T+WL IPV++F+FNHSP IS FAV+ + ++G  A +K   
Sbjct: 205 AAVKEVP-----AVGDFLG-TIWLTIPVLIFAFNHSPAISQFAVSLKRDHGSNASRKADI 258

Query: 250 ILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIA 309
           IL    +M+V  VM FVFSCVLSL+PA LA AK QN+ ILSYLAN F++  +++  P IA
Sbjct: 259 ILRNTAMMLVGFVMLFVFSCVLSLSPAQLAEAKSQNLPILSYLANVFDSGFVSYFGPFIA 318

Query: 310 IIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPS 369
            +AI  SF GHY+GA EG +G++ K L GKGK ++  KLNR    FM +T W VA +NPS
Sbjct: 319 FVAIVSSFFGHYMGASEGMSGIIKKQLEGKGKPVDEGKLNRFILGFMFLTIWAVAVINPS 378

Query: 370 ILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSL 427
           ILGMIE LGGPIIA IL+LMPMYA+ +VPA++ Y G ISN+FV++ GL++++AI Y L
Sbjct: 379 ILGMIEALGGPIIAAILYLMPMYAVYRVPALKAYRGRISNIFVIIAGLLSMTAILYGL 436