Pairwise Alignments

Query, 255 a.a., predicted DNA-binding transcriptional regulator (RefSeq) from Escherichia coli BW25113

Subject, 259 a.a., transcriptional repressor AgaR from Rhodanobacter denitrificans FW104-10B01

 Score =  131 bits (330), Expect = 1e-35
 Identities = 74/252 (29%), Positives = 137/252 (54%), Gaps = 5/252 (1%)

Query: 5   ERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGRV-- 62
           +RR  I E+V + G V +  L  R  VS  T+R+DL+ L ++G +    GG    G +  
Sbjct: 9   QRRLQISELVRQHGSVQVTSLAHRFGVSAQTVRKDLRYLAERGVMARAYGGAIDSGVMNG 68

Query: 63  -AHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVT 121
            + EP+++ K    + +K  IG  AA+L++PG  + +D+GTT + +A+ +  ++ +TVVT
Sbjct: 69  ASAEPNYEAKCTTHLDEKRRIGACAAALIKPGDTVVIDSGTTAIQLAEAVQDID-ITVVT 127

Query: 122 NDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSV-RG 180
           ND+ +   L   +N TI+  GG + R + +  G      L +L +D+ F+    + + RG
Sbjct: 128 NDYGVLTALAPKNNITIVMLGGELRRRSMAFYGGLTVEALDALHVDKLFLGVDGFDLERG 187

Query: 181 ISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASR 240
           I+T  E +  + R +   +R  + + D++K+G++     +P++  + +ITD G PE   +
Sbjct: 188 ITTHYEPEALLNRKMVETARLVIAITDSSKFGKICLHRIIPVAALNMLITDTGAPEEIIQ 247

Query: 241 ALVKQDLSLLVA 252
           A  +    L +A
Sbjct: 248 ASQQLGFELKLA 259