Pairwise Alignments

Query, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 506 a.a., anaerobic nitric oxide reductase transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  266 bits (680), Expect = 2e-75
 Identities = 161/400 (40%), Positives = 230/400 (57%), Gaps = 27/400 (6%)

Query: 303 LPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVD 362
           LPL   + ++G L L   + + F       LR +    A ++ NAL   ++ R+      
Sbjct: 117 LPLFDDEKLIGALTLDAFDPQRFDNLGTMELRALGALSAASLKNALLLDKLERVS----- 171

Query: 363 ENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAI 422
               L       +++   ++G +  M S+ +++  VA +D +VLILGETGTGKEL+ARA+
Sbjct: 172 ---LLGHGSREANNDTPPMVGNAPVMESLRQEILAVAGTDLSVLILGETGTGKELVARAV 228

Query: 423 HNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEV 482
           H  S R N+ +V +NCAA+P  + ES+LFGH +GAFTGA + R G+FE ADK +LFLDE+
Sbjct: 229 HQASPRANKALVYLNCAALPESVAESELFGHVKGAFTGAISHRSGKFETADKGTLFLDEI 288

Query: 483 GDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRL 542
           G++PL LQ KLLRVLQ  + +R+G ++ ++ DVR+IAATN+DLK+ V    FR+DLY+RL
Sbjct: 289 GELPLGLQAKLLRVLQYGDVQRIGDDRSLKVDVRIIAATNKDLKQEVLAGRFRADLYHRL 348

Query: 543 NVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELE 602
           +VFP+H+PPLRERPED+  L   F  +  + LG ++  I  + L  L N +WPGNVRELE
Sbjct: 349 SVFPLHVPPLRERPEDLGPLCGHFLEQSRKSLGLSVLRIRPDALSRLKNHDWPGNVRELE 408

Query: 603 NVIERAVLLTRG-----------NVLQLSLPDIVLPEPETPPAATVVA---LEGEDEYQ- 647
           +VI+RA  L R             +L +      LP       A V      E  D +Q 
Sbjct: 409 HVIKRAATLARAASDDGAVMIEPQMLAIGGQSASLPVQSPVTGAQVEGKNLKEATDAFQA 468

Query: 648 -LIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGI 686
             I ++L    G  A     A+ LGL    L    KRLG+
Sbjct: 469 AYIGQILSANRGNWA---STARALGLDPGNLHRLAKRLGL 505