Pairwise Alignments

Query, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 584 a.a., nif-specific transcriptional activator NifA from Rhodopseudomonas palustris CGA009

 Score =  268 bits (684), Expect = 7e-76
 Identities = 146/291 (50%), Positives = 193/291 (66%), Gaps = 6/291 (2%)

Query: 325 FTTTNLNLLRQIAE-RVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIG 383
           F T   NL+ Q  +    +A D      E HRL++ L +       +   VD     I+G
Sbjct: 176 FLTMVANLIGQTVKLHRVVARDRERLMAESHRLQKELSELKPERERKRVKVDG----IVG 231

Query: 384 RSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPA 443
            S A+  +L +V ++A+S S VL+ GE+GTGKELIA+AIH LS R N   +K+NCAA+P 
Sbjct: 232 ESPAIRKLLAKVSIIAKSQSPVLLRGESGTGKELIAKAIHELSARANGPFIKINCAALPE 291

Query: 444 GLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFE 503
            +LES+LFGHE+GAFTGA A R GRFELADK +LFLDE+G++    Q KLLRVLQEQEFE
Sbjct: 292 SVLESELFGHEKGAFTGAIASRKGRFELADKGTLFLDEIGEISASFQAKLLRVLQEQEFE 351

Query: 504 RLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLA 563
           R+G N+ I+ +VR++AATNR+L++ VA +EFR+DLYYR+NV P+ LPPLR+RP DIPLLA
Sbjct: 352 RVGGNQTIKVNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPLRDRPSDIPLLA 411

Query: 564 KAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRG 614
             F     +  GR + +  +  L  L    +PGNVRELEN + R   L  G
Sbjct: 412 SEFLKNFNKENGREL-AFESHALDLLKACSFPGNVRELENCVRRTATLAMG 461