Pairwise Alignments

Query, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 579 a.a., transcriptional regulator, NifA subfamily, Fis Family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  268 bits (685), Expect = 5e-76
 Identities = 170/452 (37%), Positives = 256/452 (56%), Gaps = 18/452 (3%)

Query: 188 RILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQH 247
           + L AI+      LD+++ + EV + +     +   +I L      +L I ++H L  + 
Sbjct: 11  KALYAISQVFDRALDLEQALGEVLRVLSETLSMKRATITLPDRETGQLVIAASHGLTPEE 70

Query: 248 PAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQ----TLCLL 303
                  +DE  T T  +F++    ++     D L      L  T   +++    +   +
Sbjct: 71  RGRGVYRLDEGVTGT--IFQTARPYIVRDVRTDPL-----FLDRTGARKVEKGKISFLGV 123

Query: 304 PLMSGDTMLGVLKLAQC-EEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVD 362
           P++     +GVL + +   + V T+ ++  L  +A  VA  +      ++++   + L  
Sbjct: 124 PILKQGAPIGVLNVDRLFSDDVSTSEDVEFLGIVATLVAQFLS---LNEQLNERVDTLRR 180

Query: 363 ENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAI 422
           EN+ L  ++  +D     I+GRS AM  V +Q+E VA + +TVL+LGE+G GK LIAR +
Sbjct: 181 ENVKLRTRV--LDERGDYIVGRSAAMLDVQRQIERVAPTRATVLLLGESGVGKTLIARLL 238

Query: 423 HNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEV 482
           HNLS R     VK+NCA++P  LLE++LFGHE+GAFTGA+A R GRFE A + ++FLDE+
Sbjct: 239 HNLSDRMVHPFVKVNCASIPETLLEAELFGHEKGAFTGAAAVRAGRFEEAHRGTIFLDEI 298

Query: 483 GDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRL 542
           G++P  +Q KLLRV+Q++EFERLGSN+  + DVR++AATNRDL  +     FR DLYYRL
Sbjct: 299 GELPPGIQAKLLRVIQDREFERLGSNQTHRVDVRIVAATNRDLALLSEQGRFRQDLYYRL 358

Query: 543 NVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELE 602
            VFPI +P LRERP+D+  L   F  K AR   R I   P + L  L   EWPGNVRE+E
Sbjct: 359 CVFPIRVPSLRERPDDVERLLNHFLAKAARDYRRVITLAP-DALGLLRRHEWPGNVREME 417

Query: 603 NVIERAVLLTRGNVLQLSLPDIVLPEPETPPA 634
           N+IER  +L+    +     + +L    T  A
Sbjct: 418 NLIERLAILSESGQIDRRFLEPLLEHSATENA 449