Pairwise Alignments

Query, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 515 a.a., nif-specific regulatory protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  273 bits (699), Expect = 1e-77
 Identities = 173/435 (39%), Positives = 255/435 (58%), Gaps = 20/435 (4%)

Query: 188 RILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQH 247
           + L AI+N +   L +++ ++E  + +     +   +I L      +L I ++H L ++ 
Sbjct: 11  KALRAISNVIDRALQLEDALTETLRVLAETLAMQRGTITLLDGETGQLVIAASHGLSREE 70

Query: 248 PAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQ----TLCLL 303
                  +DE  T T  +F +    L+     D L      L  T   +++    +   +
Sbjct: 71  QERGVYRLDEGVTGT--IFSTGRPYLVRDVRNDPL-----FLDRTGARRVERGKVSFLGV 123

Query: 304 PLMSGDTMLGVLKLAQC-EEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKER-LV 361
           P++S    +GVL + +   + V    ++  L  +A  VA      L+  E    +ER L 
Sbjct: 124 PILSKGRPVGVLNVDRLFGDAVSCAEDIEFLEVVATLVA----QFLSLNEQVAARERALR 179

Query: 362 DENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARA 421
            EN+ L  ++  +DS    I+GRS AM  V + ++ VA + +TVL+LGE+G GK LIAR 
Sbjct: 180 RENMQLRTRV--LDSRGDFIVGRSGAMAEVQRYIQRVAGTRATVLLLGESGVGKTLIARL 237

Query: 422 IHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDE 481
           +H LS R +   +K+NCA++P  LLE++LFGHE+GAFTGA + R+GRFE A + ++FLDE
Sbjct: 238 VHTLSEREHHPFIKVNCASIPESLLEAELFGHEKGAFTGAVSARMGRFEEAHEGTVFLDE 297

Query: 482 VGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYR 541
           +G++P  +Q KLLRVLQE+EFERLGSN+  + +VR++AATNRDL   V    FR DLYYR
Sbjct: 298 IGELPPGIQAKLLRVLQEREFERLGSNRTRRVNVRIVAATNRDLAAQVDAGRFRQDLYYR 357

Query: 542 LNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVREL 601
           L VFPI +PPLRERPEDI  L   F  K+AR  GR++   P + L  L    WPGNVRE+
Sbjct: 358 LCVFPIRVPPLRERPEDITGLLNHFLAKVARDYGRSLVLAP-DALELLQRYAWPGNVREM 416

Query: 602 ENVIERAVLLTRGNV 616
           EN+IER  +LT G +
Sbjct: 417 ENLIERMAILTDGTL 431