Pairwise Alignments

Query, 504 a.a., putative 2-component transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 511 a.a., anaerobic nitric oxide reductase transcription regulator (RefSeq) from Shewanella loihica PV-4

 Score =  603 bits (1556), Expect = e-177
 Identities = 313/512 (61%), Positives = 392/512 (76%), Gaps = 10/512 (1%)

Query: 1   MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA 60
           M+ S   L  +A+++  G+ + DRF RL+ T+R+ ++CDA+ALL +  +QF PLAI+GL+
Sbjct: 1   MALSQTQLTRMALDITSGLSNHDRFSRLLDTIRESMQCDAAALLEFKGQQFTPLAINGLS 60

Query: 61  KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQ-ESLKVHACVGLPLF 119
            DVLGRRF L  HPRLEAIARAGDVVRFPADS+LPDPYDGLIP Q ++L VHAC+GLPL 
Sbjct: 61  PDVLGRRFVLHEHPRLEAIARAGDVVRFPADSDLPDPYDGLIPNQGDNLTVHACIGLPLL 120

Query: 120 AGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLP----GD 175
           A  +LIGA+T+DG  PDQF  F++E+LR I+A+A+ +L+NALLI++LE Q +      GD
Sbjct: 121 ADGSLIGAVTIDGFDPDQFKSFTNEQLRGISAIASASLNNALLIDKLEKQALQAQWDKGD 180

Query: 176 ATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRA 235
           +T        ++IG S  M  LK+EI +VA +DLNVLI GETGTGKEL+A  IH+ S RA
Sbjct: 181 STSQSKEGTKEIIGQSQVMNNLKQEIAVVAPTDLNVLIMGETGTGKELIAHEIHQGSMRA 240

Query: 236 VNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLAL 295
             PLVYLNCAALPESVAESELFGHVKGAFTGA+SNRSGKFEMAD G+LFLDEIGEL L L
Sbjct: 241 SQPLVYLNCAALPESVAESELFGHVKGAFTGAVSNRSGKFEMADKGSLFLDEIGELPLTL 300

Query: 296 QAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSV 355
           QAKLLRVLQYGD+QRVGDDR L+VDVR++AATN++L+ EVLAGRFRADL+HRLSVFPL  
Sbjct: 301 QAKLLRVLQYGDLQRVGDDRSLKVDVRIIAATNKNLKNEVLAGRFRADLYHRLSVFPLIA 360

Query: 356 PPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAV 415
           PPLRER  D+ LL+G+F E+CR + GL  + LS  +  +L+ Y +PGNVRELEH+I+RA 
Sbjct: 361 PPLREREQDITLLSGFFVERCRQQLGLQTLRLSPTSLAMLECYQWPGNVRELEHSIYRAA 420

Query: 416 VLARATRSGDEVILEAQHFAF----PEVTLPTPEVAAVPVVKQNLREATEAFQRETIRQA 471
           +LARA  SG   ++  +HF F    P     + +  A P    +L++ATEAFQ + IRQ 
Sbjct: 421 ILARAQSSGSNGVINPEHFEFANQAPRAVQSSGKTLA-PQFSGSLKQATEAFQADYIRQT 479

Query: 472 LAQNHHNWAACARMLETDVANLHRLAKRLGLK 503
           L+Q+ +NWAA AR LE D  NLHRLAKR+GLK
Sbjct: 480 LSQHDNNWAATARDLEVDSGNLHRLAKRIGLK 511