Pairwise Alignments

Query, 390 a.a., multidrug efflux system (NCBI) from Escherichia coli BW25113

Subject, 402 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  337 bits (863), Expect = 5e-97
 Identities = 183/385 (47%), Positives = 243/385 (63%), Gaps = 3/385 (0%)

Query: 7   TQTPQQPVKKSGKRKRLLLLLT---LLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQ 63
           T+ P  P      R+R  LL++   L FI +  A GIYW+   R    TD+AYVAGN IQ
Sbjct: 2   TEPPSLPSSDDSDRRRRTLLMSAAALTFIALGAAYGIYWWTTARFDMSTDNAYVAGNIIQ 61

Query: 64  IMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSK 123
           +  Q++G+VT V AD+TDFV+ G +LVT+DPTDAR A ++A+  LA +VRQ   L     
Sbjct: 62  VSPQIAGTVTAVHADDTDFVEAGQMLVTIDPTDARLALDQAEATLAETVRQVRALFSQDG 121

Query: 124 QLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNA 183
            L A +  Q+  LA+ + D+ RR  L N   +  EE++HARDAVT A A L  A +Q  A
Sbjct: 122 VLAATVLAQETTLARLREDFARRQRLANTGAVSAEEVKHARDAVTQASAHLAGARKQQEA 181

Query: 184 NQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPL 243
           N+ +I  T L   P V +AA +VR A++A  RT + +P++G V+RRAVQ G + +P TPL
Sbjct: 182 NRVLIDMTGLTSHPRVARAAAQVREAYVAWRRTVVPAPVSGQVARRAVQVGQRTTPGTPL 241

Query: 244 MAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLL 303
           MA++P   +WVDANFKE Q+  MR+GQPV +T DIYGDD+ Y G V GL  GTG+AFSLL
Sbjct: 242 MAIIPLDEVWVDANFKEGQLGAMRLGQPVLLTADIYGDDIVYRGTVAGLAAGTGAAFSLL 301

Query: 304 PAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTP 363
           PAQNATGNWIKVVQR+PVRI LD + L Q PLR+GLS    V+  ++ G  +A   +   
Sbjct: 302 PAQNATGNWIKVVQRVPVRIALDPRDLAQRPLRVGLSMEAHVSIRDQSGPQMATGRQKDI 361

Query: 364 VAVSTAREISLAPVNKLIDDIVKAN 388
           VA +            LI D++  N
Sbjct: 362 VARTDVFADLDHDAEALIKDLIARN 386