Pairwise Alignments

Query, 220 a.a., putative transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 201 a.a., HTH-type transcriptional regulator, GntR family from Phaeobacter inhibens DSM 17395

 Score = 81.3 bits (199), Expect = 1e-20
 Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 16/200 (8%)

Query: 9   YRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVAS 68
           Y  L   I+ G     EKLR   +   +     P+REAL +L A  L   + ++G RV +
Sbjct: 12  YHALSERIVTGALPAGEKLRQDHIARDFNASHVPVREALLRLEAHGLAQSIPRRGMRVTA 71

Query: 69  MSEQELLDIFDARANMEAMLVSLAIAR-GGDEWEADVLAKAHLLSKLEACDASEKMLDEW 127
           +   E+ ++ + R ++E + +  A A  G  E EA   A+        ACDA+  M D W
Sbjct: 72  LDPSEIREVIEMRVSLELLALQNAFAHLGSAELEAADAARL-------ACDAATDMAD-W 123

Query: 128 DLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFI-WLRRTVLSVEMLEDKHDQHQTL 186
           + +++AFH  I++ CG   LL   + L   +AR+ F  W  R    V+        H  +
Sbjct: 124 EQKNRAFHRVILSPCGMPRLLATIDDLHIASARHLFANWKHRWSQRVD------TDHALI 177

Query: 187 TAAVLARDTARASELMRQHL 206
             A+  RD   A +++R+HL
Sbjct: 178 VQAMRRRDVTTACDILRRHL 197