Pairwise Alignments

Query, 332 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (565), Expect = 1e-62
 Identities = 125/324 (38%), Positives = 196/324 (60%), Gaps = 5/324 (1%)

Query: 2   SASSLPLPQGKSVSLKQFVSRH-INEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDA 60
           S S+  +    S + K+ +S+  + E   L+ +  L +V S   P F +++N +N+LR  
Sbjct: 6   SMSTRTMTNTTSDNRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQT 65

Query: 61  ATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGT 120
           +   I A  MTL+I++  ID+SVG ++A      A L+  EVP+ VA    LL GA +G 
Sbjct: 66  SVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEVPVLVAVPTALLAGAALGA 125

Query: 121 LAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLD---WLG-GQFLGVP 176
           ++G++     V +F+ATL   + LRG+ +  T+  P+     +  D   W G G  LG+P
Sbjct: 126 ISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIP 185

Query: 177 VSALIMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAV 236
           V   +M+V+FA   ++   T FGR V+AVGGN +A +L GINV RV+I ++ + GLLAA+
Sbjct: 186 VPVWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAAL 245

Query: 237 TGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLV 296
            GI++ +RL S    A  G E D IAAVV+GGT+L GG+G + GTL+G L+I  + N L 
Sbjct: 246 AGIIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALN 305

Query: 297 LLGINSFFQQVVRGVIIVVAVLAN 320
           LL ++S++Q + + V+I++AVL +
Sbjct: 306 LLDVSSYYQMIAKAVVILLAVLVD 329