Pairwise Alignments

Query, 332 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  205 bits (522), Expect = 1e-57
 Identities = 110/306 (35%), Positives = 178/306 (58%), Gaps = 3/306 (0%)

Query: 13  SVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTL 72
           + SLK+ +   + E GLLV+ A  ++V +L  P F++  N + +L+   TIG+ A  M  
Sbjct: 2   TTSLKKLL---LGEQGLLVIFAAAFVVVALTVPNFLTERNMLGLLQSVVTIGVVACTMMF 58

Query: 73  IIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLRGVFNVP 132
            + S + D+SVG  VAF  +           + +  L  L  G ++G   G++   F + 
Sbjct: 59  CLASRDFDLSVGSTVAFSGMVAVMASNATGSIVLGLLAALACGGIVGLANGIVIARFRIN 118

Query: 133 SFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLFALFVFI 192
           + + TL     +RG  L  ++   V I++         +FL VP    +M + F +F F+
Sbjct: 119 ALITTLATMQIVRGFALIASDGRAVGINDPVFYQLSLSKFLTVPTPIWVMALFFIVFGFL 178

Query: 193 SRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGA 252
             +T FG++  A+GGN  A++L G++V R+RI IF L GL+ AV G+LLA+R+ SG   A
Sbjct: 179 LNRTVFGKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNA 238

Query: 253 ANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVI 312
           A GLE  VI+A V+GG +L+GGR ++ G ++GVL++ +  N + LL I +F+Q VVRG+I
Sbjct: 239 ATGLELSVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLI 298

Query: 313 IVVAVL 318
           +++AVL
Sbjct: 299 LLIAVL 304