Pairwise Alignments

Query, 770 a.a., fused transglycosylase/transpeptidase (NCBI) from Escherichia coli BW25113

Subject, 852 a.a., carboxypeptidase/penicillin-binding protein 1A from Klebsiella michiganensis M5al

 Score =  127 bits (319), Expect = 2e-33
 Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 7/205 (3%)

Query: 64  RYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLTMQV 123
           R PVT++ + P  ++A I  ED  F++H GV+P  + RAA   + SG    G ST+T Q+
Sbjct: 66  RIPVTLQQMPPELIKAFIATEDSRFYEHHGVDPVGIFRAASVAMFSGHASQGASTITQQL 125

Query: 124 AR--LLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAYL 181
           AR   L P  KT   K+++ + A+++E  L+K EIL LYLN+   G    G+GAA+  Y 
Sbjct: 126 ARNFFLSPE-KTLMRKVKEAFLAIRIEQLLNKDEILELYLNKIYLGYRAYGVGAAAQVYF 184

Query: 182 GKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGVWSREQVKESR 241
           GKS   L+ SE A++A LP+APS   P    +RA A RN VL RM  +G  ++ Q  ++R
Sbjct: 185 GKSVDQLTLSEMAVIAGLPKAPSTFNPLYSMDRATARRNVVLSRMLSEGYITQSQYDQAR 244

Query: 242 EEPIWLAPRQMPQLA---PLFSRMM 263
            + I  A    P++A   P  S M+
Sbjct: 245 SQTI-DASYHTPEIAFSSPYLSEMV 268



 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 13/195 (6%)

Query: 271 KITTTLDAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGH 330
           K+   +  G Q  + ++  +W     P  + A++ ++  +  +   VG  D N  S+F  
Sbjct: 397 KVNDVVQTGQQVWVRQVGSSWWLSQVPDVNSALVSINPQNGAIIALVGGFDFNQ-SKFNR 455

Query: 331 VDMVNSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRT------GDYRPGNFDSGFH 384
                ++R  GS +KPF+Y  A+D+GL   AS+L DVP          D+RP N    + 
Sbjct: 456 A--TQALRQVGSNIKPFLYTAAMDKGLTL-ASMLNDVPISRWDAGSGSDWRPKNSPPQYA 512

Query: 385 GPISMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAK 444
           GPI + + L +S N+  V+ + A G    A  L+  G P           SL LG A   
Sbjct: 513 GPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFP---AQNIVRTESLALGSASFT 569

Query: 445 LEDMAAAYTAFARHG 459
              +A  Y+  A  G
Sbjct: 570 PLQVARGYSVMANGG 584



 Score = 33.1 bits (74), Expect = 6e-05
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 21/119 (17%)

Query: 511 KTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVG---------------QFGFASAVP 555
           KTGT+   +DAW  G     V  +W G  D    +G               + G  SA P
Sbjct: 717 KTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGAIKDQISGYEGGAKSAQP 776

Query: 556 LLNQVNNILLSRSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQP 614
             +     +L      P  P P  +T  +    G   L  G GN R   A + +DG+QP
Sbjct: 777 AWDDFMKRVLEGVPEEPLTPPPGIITVNIDRSTG--QLASG-GNSR---AEYFIDGTQP 829