Pairwise Alignments

Query, 337 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 363 a.a., RodZ family helix-turn-helix domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  106 bits (265), Expect = 8e-28
 Identities = 102/341 (29%), Positives = 149/341 (43%), Gaps = 26/341 (7%)

Query: 8   DQNEALTTGA-RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66
           D+++AL   A RLR  RE+  L+   +A RL +    +  +E     A    TF +G IR
Sbjct: 29  DRDDALREIAERLRAGRERQRLTVDDLAGRLKVAPGKLSAVESADVSALPDMTFTKGLIR 88

Query: 67  SYARLVHIPEEELLPGLEKQAPLRAAKVAPM----QSFS----LGKRRKKRDGWLMTFTW 118
           +YAR + +  ++ L  L  +AP+    + P     +SFS      KRR     WL+    
Sbjct: 89  AYARALQVDVDDQLARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGSGRWLIG--- 145

Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPATT 177
            VL  V+   GA    DR  Q     T A Q++   +  +    Q+ P   + T + A  
Sbjct: 146 -VLVAVVVAGGALAGMDRLKQWFASQTAATQNTESTTKEAPAAEQTAPAQAAPTAEQAPA 204

Query: 178 STPPASVDTTATNTQTPA-----VTAPA--PAVDPQQ-NAVVSPSQANVDTAATPAPTAA 229
            TP AS+ T  T     A     VTAP   PA  P+  N    P+ A        A    
Sbjct: 205 ETPAASMPTPLTPVAPAAPASGVVTAPLAPPATLPRSGNGAAVPAAAVAGAGVKAAVVNV 264

Query: 230 TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT 289
             P   A  P + A           + + F+   W E+ D TGK L SG+ ++    +LT
Sbjct: 265 DAP--VAVRPAETAKPAESAGGSGTVSVRFSGSSWYEIKDKTGKTLASGLSKEGDARDLT 322

Query: 290 GQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTL 329
           G  P+K+  G   AV+ +   G  VDL ++ R N+VAR TL
Sbjct: 323 GTPPFKVVFGNAEAVESLAVGGASVDLQKYAR-NRVARATL 362