Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 417 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Sinorhizobium meliloti 1021

 Score =  177 bits (449), Expect = 5e-49
 Identities = 123/377 (32%), Positives = 199/377 (52%), Gaps = 52/377 (13%)

Query: 6   PIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPT 65
           P  RR S  + VG V +G GAP+ VQSMTNT T D++ATV Q+ AL + G+++VR++V  
Sbjct: 9   PQPRRASVAVDVGGVIVGGGAPVVVQSMTNTDTADIDATVAQVAALHKAGSELVRITVDR 68

Query: 66  MDAAEAF-----KLIKQQVNVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIG---- 113
            ++A A      +L++  ++VPLV D H+     L       + L   RINPGN+G    
Sbjct: 69  DESAAAVPKIRERLLRLGIDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKDK 128

Query: 114 NEERIRMVVDCARDKNIPIRIGVNAGSLEKDL-------QEKYGEPTP------QALLES 160
            +++   +++ A   + P+RIGVN GSL+++L        +  G P        + +++S
Sbjct: 129 KDKQFAEIIEMAIRYDKPVRIGVNWGSLDQELLTRLMDANQANGSPLTAQQVMRETIVQS 188

Query: 161 AMRHVDHLDRLNFDQFKV--SVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV 218
           A+   +  + L   + ++  S K S V   +  Y +LA +    LHLG+TEAG    G V
Sbjct: 189 ALLSAELAEELGLPRSRIILSAKVSGVQDLIAVYAMLAARSVHALHLGLTEAGMGTKGIV 248

Query: 219 KSAIGLGLLLSEGIGDTLRVSLAADP----VEEIKVGFDILKSLRIRSRGINFIACPTCS 274
            S+  LG+L+ +GIGDT+R+SL  +P      E++V  ++L+ +  R       ACP C 
Sbjct: 249 ASSASLGILMQQGIGDTIRISLTPEPGGDRTREVQVAQELLQVMGFRQFIPVVAACPGCG 308

Query: 275 RQEFDVIGTVNALEQRL-EDI-------------ITPMDVSIIGCVVNGPGEALVSTLGV 320
           R    V      L Q++ EDI             +  + V+++GC+VNGPGE+  + +G+
Sbjct: 309 RTTSTVF---QELAQKIQEDIRASMPVWREKYPGVEALKVAVMGCIVNGPGESKHADIGI 365

Query: 321 ----TGGNKKSGLYEDG 333
               TG    + ++ DG
Sbjct: 366 SLPGTGEMPAAPVFIDG 382