Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  611 bits (1576), Expect = e-180
 Identities = 314/370 (84%), Positives = 341/370 (92%), Gaps = 3/370 (0%)

Query: 1   MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60
           M N+ PI+RR STRIYVGNVPIGDGAPIAVQSMTNTRTTDV ATV QI+ALE VGADIVR
Sbjct: 1   MFNENPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVAATVAQIRALENVGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM 120
           VSVPTMDAAEAF+ IKQQV VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIR 
Sbjct: 61  VSVPTMDAAEAFRQIKQQVKVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRA 120

Query: 121 VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV 180
           VVDCARDKNIPIRIGVN GSLEKDL +KY EPTP+ALLESAMRHVD LDRLNFDQFKVSV
Sbjct: 121 VVDCARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL 240
           KASDVFLAVESYRLLAKQI QPLHLGITEAGGAR+GAVKSA+GLG+LL+EGIGDTLR+SL
Sbjct: 181 KASDVFLAVESYRLLAKQIKQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV 300
           AADPVEE+KVGFDILKSLRIRSRGINFIACP+CSRQEFDVI TVN LE+RLED+ T MDV
Sbjct: 241 AADPVEEVKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300

Query: 301 SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVR-KDRLDNNDMIDQLEARIRAKASQL 359
           SIIGCVVNGPGEALVS LG+ GG+KKSG Y+DG+R K+R DN++++D LEA+IRAKAS +
Sbjct: 301 SIIGCVVNGPGEALVSHLGLAGGHKKSGYYDDGIRQKERFDNDNLVDALEAKIRAKASLM 360

Query: 360 DEARRIDVQQ 369
             A RI VQ+
Sbjct: 361 --ANRIPVQE 368