Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 363 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  323 bits (829), Expect = 3e-93
 Identities = 164/327 (50%), Positives = 225/327 (68%)

Query: 7   IQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTM 66
           I+RR++  + +G+V IG   P+ VQSM NT T DV+ATV QI+AL  VG ++VR++V   
Sbjct: 3   IERRRTREVRIGSVRIGGDNPVVVQSMANTDTRDVDATVGQIRALAAVGCEVVRLAVLNE 62

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCAR 126
            AA A   I+    VPLVADIHFD+R+A+   E GVD LRINPGNIG E  +  VVD AR
Sbjct: 63  AAAAAIGPIRAASPVPLVADIHFDHRLAVAALEAGVDALRINPGNIGGEANVARVVDAAR 122

Query: 127 DKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSVKASDVF 186
            +   IR+GVN+GS+EK L E++G PTP+A++ESA+ HV  L+   F   K+S+K+S V 
Sbjct: 123 ARGACIRVGVNSGSVEKHLLERFGGPTPEAMVESALGHVRMLEDRGFGDIKISLKSSSVL 182

Query: 187 LAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVE 246
             +++YR+LA++ D PLH+G+TEAG    G+VKS++GLG+LL  GIGDTLRVSL +DPVE
Sbjct: 183 HTIDAYRVLAERCDYPLHIGVTEAGTMLRGSVKSSVGLGVLLWLGIGDTLRVSLTSDPVE 242

Query: 247 EIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCV 306
           EI V ++IL+SL +R RG   I+CPTC R E  +I     +E+RL        V+++GC 
Sbjct: 243 EIPVAWEILRSLGLRHRGPEIISCPTCGRTEIGLISLAQEVERRLAGETENFKVAVMGCA 302

Query: 307 VNGPGEALVSTLGVTGGNKKSGLYEDG 333
           VNGPGEA  + +G+ GG  K  ++  G
Sbjct: 303 VNGPGEAREADIGIAGGRDKGIIFRKG 329