Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 428 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Ralstonia sp. UNC404CL21Col

 Score =  184 bits (467), Expect = 4e-51
 Identities = 135/394 (34%), Positives = 208/394 (52%), Gaps = 50/394 (12%)

Query: 6   PIQRRKS--TRIYVGN--VPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRV 61
           P+ RR S   +I  G+  V +G  AP+ VQSMTNT T+D   T  Q+K L R G+++VR+
Sbjct: 16  PLPRRNSRAAQIRWGDRVVHVGGDAPVCVQSMTNTDTSDAIGTAIQVKELARAGSELVRI 75

Query: 62  SVPTMDAAEAFKLIKQQ-----VNVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIG 113
           +V T  AA A   I++Q     V+VPLV D H++    L+        L   RINPGN+G
Sbjct: 76  TVDTPAAAAAVPAIREQLDRMGVDVPLVGDFHYNGHKLLQDYPECAQALSKYRINPGNVG 135

Query: 114 N----EERIRMVVDCARDKNIPIRIGVNAGSLEKDL-----QEKYGEPTP--------QA 156
                + +   +++ A   N P+RIGVN GSL++DL      E     TP        +A
Sbjct: 136 QGAKRDTQFAQMIEIACRYNKPVRIGVNWGSLDQDLLARIMDENAQRATPWDARAVMVEA 195

Query: 157 LLESAMRHVDHLDRLNF--DQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGAR 214
           L+ SA++     + L     Q  +S K S V   +  YR LA++ +  LHLG+TEAG   
Sbjct: 196 LITSAIQSAQKAEELGLPGSQIILSCKVSAVQDLIAVYRELARRCNYALHLGLTEAGMGS 255

Query: 215 SGAVKSAIGLGLLLSEGIGDTLRVSLAADP----VEEIKVGFDILKSLRIRSRGINFIAC 270
            G V S   L +LL EGIGDT+R+SL  +P     +E+ V  +IL+++ +R+     IAC
Sbjct: 256 KGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVIVAQEILQTMGLRNFTPMVIAC 315

Query: 271 PTCSRQEFDVIGTVNA-LEQRLEDI----------ITPMDVSIIGCVVNGPGEALVSTLG 319
           P C R    V   + A ++  L +           +  M+V+++GC+VNGPGE+  + +G
Sbjct: 316 PGCGRTTSTVFQELAARIQSYLREQMPKWKTQYPGVEEMNVAVMGCIVNGPGESKHANIG 375

Query: 320 V----TGGNKKSGLYEDGVRKDRLDNNDMIDQLE 349
           +    TG +  + ++ DGV+   L    + ++ +
Sbjct: 376 ISLPGTGESPAAPVFVDGVKVKTLRGERITEEFQ 409