Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 438 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Burkholderia phytofirmans PsJN

 Score =  185 bits (470), Expect = 2e-51
 Identities = 131/383 (34%), Positives = 200/383 (52%), Gaps = 60/383 (15%)

Query: 20  VPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQ- 78
           V IG  AP+ VQSMTNT T D   T  QIK L + G+++VR++V T +AA A   +++Q 
Sbjct: 45  VTIGGDAPVRVQSMTNTDTADAIGTAIQIKELAQAGSELVRITVNTPEAAAAVPAVREQL 104

Query: 79  ----VNVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIGN----EERIRMVVDCARD 127
               V+VPLV D H++  + L+      + L   RINPGN+G+    + +   +++ A  
Sbjct: 105 DRMGVSVPLVGDFHYNGHLLLRDYPACAESLSKYRINPGNVGHGAKRDTQFAQMIEAAAK 164

Query: 128 KNIPIRIGVNAGSLEKDL-----QEKYGEPTP--------QALLESAMRHVDHLDRLNF- 173
            + P+RIGVN GSL++DL      E     TP        +AL++SA+   +    L   
Sbjct: 165 YDKPVRIGVNWGSLDQDLLAKMMDENAARATPWEAQSVMYEALIQSAIGSAERAVELGLS 224

Query: 174 -DQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGI 232
            +Q  +S K S V   +  YR LA++ D  LHLG+TEAG    G V S   L +LL +GI
Sbjct: 225 RNQIILSCKVSGVQDLIAVYRELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGI 284

Query: 233 GDTLRVSLAADP----VEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALE 288
           GDT+R+SL  +P      E+ VG +IL+++ +RS     IACP C R       T + L 
Sbjct: 285 GDTIRISLTPEPGASRTGEVIVGQEILQTMGLRSFTPMVIACPGCGR-------TTSTLF 337

Query: 289 QRLEDII------------------TPMDVSIIGCVVNGPGEALVSTLGV----TGGNKK 326
           Q L   I                    M V+++GC+VNGPGE+  + +G+    +G N  
Sbjct: 338 QELASQIQTYLRTQMPVWRDQYPGVEKMHVAVMGCIVNGPGESKQANIGISLPGSGENPA 397

Query: 327 SGLYEDGVRKDRLDNNDMIDQLE 349
           + ++ DG +   L  +++  + +
Sbjct: 398 APVFIDGEKVKTLRGDNIAQEFQ 420