Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 371 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  612 bits (1578), Expect = e-180
 Identities = 312/369 (84%), Positives = 345/369 (93%), Gaps = 3/369 (0%)

Query: 1   MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60
           M+N+ PI+RR STRIYVGNVPIGDGAPIAVQSMTNT+TTDVEATV QI+ALE+VGADIVR
Sbjct: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM 120
           VSVPTMDAAEAFK+IKQ V+VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIR 
Sbjct: 61  VSVPTMDAAEAFKVIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120

Query: 121 VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV 180
           VV+CARDKNIPIRIGVN GSLEKDL +KY EPTP+ALLESAMRHVD LDRLNFDQFKVSV
Sbjct: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL 240
           KASDVFLAVESYRLLAKQI QPLHLGITEAGGAR+GAVKSA+GLG+LL+EGIGDTLR+SL
Sbjct: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV 300
           AADPVEEIKVGFDILKSLRIRSRGINFIACP+CSRQEFDVI TVN LE+RLED+ T MDV
Sbjct: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300

Query: 301 SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVR-KDRLDNNDMIDQLEARIRAKASQL 359
           SIIGCVVNGPGEALVS +G+TGG++KSG Y++G R K+R DN++++D LEA+IRAKASQ+
Sbjct: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360

Query: 360 DEARRIDVQ 368
             A RI V+
Sbjct: 361 --ANRIQVK 367