Pairwise Alignments

Query, 479 a.a., hydrogenase 4 membrane subunit (NCBI) from Escherichia coli BW25113

Subject, 505 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  325 bits (833), Expect = 2e-93
 Identities = 195/465 (41%), Positives = 275/465 (59%), Gaps = 16/465 (3%)

Query: 26  RAAEWGVLFAA---LTTLCMLSLISAFYQADKVAVTLTLVNV----GDVALFGLVIDRVS 78
           RA   GV+F A    + L +   I+A         TL L  +     D ALFGL +D +S
Sbjct: 41  RAGANGVIFLASLIFSGLALAGAIAAILAVFPGPWTLGLGRLPWLASDQALFGLALDPLS 100

Query: 79  TLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGT-NRYYAFLLVFIGAMAGLVLSSTLLG 137
            L+L V+   G LV +YS GY++  N EHP +    RYY F+ +FI AM GLV S     
Sbjct: 101 CLMLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYFFVCLFITAMVGLVSSPNYFQ 160

Query: 138 QLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAAT--LFLQTGTFAL 195
             LF+E+T  CSW LIS+Y   +A +SA KALLITH    GL+LAAA   ++++TG+FA 
Sbjct: 161 LFLFWELTTLCSWGLISFYGDAEALKSAYKALLITH--GAGLFLAAAVVLIYVETGSFAF 218

Query: 196 SAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVY 255
            A++ L    + LV   +  AA  K+AQ P   WLP AM APTP S+YLHAA+MVK G+Y
Sbjct: 219 DAINLLTPGLKSLVIAFMGIAALAKAAQFPFFTWLPTAMAAPTPASSYLHAAAMVKAGIY 278

Query: 256 IFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGL 315
           + AR  +     P  +G    V+A+VT+    ++Y PQ D+KRLLA+STI  LG+M  G+
Sbjct: 279 LLARLALSVDAFPPELGLALSVIAIVTMCLAVVLYFPQDDLKRLLAFSTIANLGYMVLGI 338

Query: 316 SLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVG 375
           ++   GSR ALEG + ++V H+F KSL FL  GA+SY+ GTR +  L G+   +P+  + 
Sbjct: 339 AMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVGAISYATGTRKIGLLSGLGRKMPVTALA 398

Query: 376 FCVAALAITGVPPFNGFFSKFPLFAAGFALSVEY-WILLPAMILLMIESVASFAWFIRWF 434
           F + A+AI+G+PPFN F+SK+ + +    LS  + W L    +L + ESVA FAWF+   
Sbjct: 399 FVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTWGWTL---AVLTLAESVAGFAWFLHIV 455

Query: 435 GRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ 479
            +V  G  S    +A     +M + LIVL+  S++S+V A   +Q
Sbjct: 456 HKVFFGPVSPTAENARDPGAAMLIPLIVLMAFSVLSTVFALPMIQ 500