Pairwise Alignments

Query, 1197 a.a., hybrid sensory histidine kinase in two-component regulatory system with EvgA (NCBI) from Escherichia coli BW25113

Subject, 1068 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  273 bits (697), Expect = 7e-77
 Identities = 178/503 (35%), Positives = 265/503 (52%), Gaps = 11/503 (2%)

Query: 692  RDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAI 751
            R L+  L V K  A +A  AK+ F+ATMSHEIRTP+++++G LEL             AI
Sbjct: 559  RRLLEQLRVAKESADEANRAKTTFVATMSHEIRTPMNAVIGLLELALKKADQGIVDRFAI 618

Query: 752  SLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALS 811
             +A      +L LIG+ILD+ +IESG   L PQ  ++ TL+++    F  +A  K + L 
Sbjct: 619  EVASGAAHGMLDLIGDILDIARIESGKLSLAPQRANLHTLIESVARIFEGLAWQKHLRLH 678

Query: 812  CSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAV-IKMTIM 870
                      V IDP  FKQ++SNLLSNA+KFT +G V+++     +  +  + + + + 
Sbjct: 679  WVLDAGIDRDVLIDPLRFKQIVSNLLSNAIKFTDQGEVRLSVRGEPVPGHERLGLCLRVE 738

Query: 871  DSGSGLSQEEQQQLFKRYSQTSAGRQ--QTGSGLGLMICKELIKNMQGDLSLESHPGIGT 928
            D+G G+S E+Q++LF  ++Q     Q  ++GSGLGL+I + L + M G L L S PG GT
Sbjct: 739  DTGCGISPEDQRRLFSPFAQAGQHPQSARSGSGLGLVISRTLCEMMGGTLVLHSVPGEGT 798

Query: 929  TFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEA 988
               + + + +   +    A+ E  + +P  LSIL+ DD+P NRLLL +QL  LG+ V EA
Sbjct: 799  QVEVLLDLPLLDALPATPAEVEALLPVPA-LSILVVDDYPANRLLLSQQLGYLGHRVREA 857

Query: 989  TDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQN-----SSLPIWGLTANAQAN 1043
             +GV+ L     +H+D++ITD NMP M G+EL R +R +      S + I G TANAQ  
Sbjct: 858  QNGVEGLQAWRSEHFDVVITDCNMPLMSGYELARTIRAEERDRSLSPVVILGFTANAQPE 917

Query: 1044 EREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQ 1103
            E+++    GM+ CLFKP+ L  L   L+ +   A        LD+  L+  T  D   ++
Sbjct: 918  EKQRCAEAGMDDCLFKPIGLKALNACLASVMPDARAPQSGDGLDLTGLEQLTGGDTSAIR 977

Query: 1104 EILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPV 1163
             +L         D           D        HRI G A I+  Q+LI     LE    
Sbjct: 978  ALLEELVSSNAADQARLLDLSTRLDLPGLADLAHRIKGGARIIQAQRLIAACEALESACR 1037

Query: 1164 SDDS--KPEILQLLNSVKEHIAE 1184
             +D+    E ++ L    EH+AE
Sbjct: 1038 GNDTVLLAEAVEDLRQAIEHLAE 1060



 Score =  192 bits (487), Expect = 2e-52
 Identities = 134/517 (25%), Positives = 239/517 (46%), Gaps = 2/517 (0%)

Query: 51  WLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAM 110
           WL  K  L++       A    T + +   G+ ADY  LL + L++ + ++ Y  H +A+
Sbjct: 52  WLRQKGTLLLGASAPDYAPFSITGNGRDYEGLTADYAQLLGQLLHVTVQVQRYPSHAEAL 111

Query: 111 DALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLTSPKPVNIARV 170
            AL  GE+D+ L         + D+A ++      P LV  + DS           +A +
Sbjct: 112 QALRGGEIDL-LGTANGFEAADPDLAMSQAYADDLPTLVARIDDSQDLPPDLAGKRVAML 170

Query: 171 ANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNV 230
            +Y P E +   +P+A++  F +   A+ +V+ G  D ++G +I ++ +IS+ + +++ +
Sbjct: 171 YHYLPSETVKGFYPEASLQLFPSTLSAIGAVAFGQADVYLGDSISSNYLISKNYLNNVQL 230

Query: 231 VKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLEL 290
             +     Q   F   +++  +  ++N  + A+    R  + + W   G      + L  
Sbjct: 231 ADFSRMEVQPFAFAVSRDNERVLRIVNAALHAIPASERMVILRRWSAGGASMPGQQALHF 290

Query: 291 TEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSH 350
           + +E++W+  HP +KV  N    P +  DE G +RG+  D+L  I+L+TGL F       
Sbjct: 291 SVNEQRWLDAHPRIKVAANENFLPLTFFDEQGHLRGIGADVLARISLRTGLKFDVQRGDS 350

Query: 351 NIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQ-KAPDSEQTLKKGMK 409
                 Q+  G  D++  AI S + E+ + F   ++T P+V V+  +A         G +
Sbjct: 351 VDDLIGQIKSGKADVLATAIPSAELEDELRFTRPYLTNPFVLVVPVRAKALTLDQMAGKR 410

Query: 410 VAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPN 469
           VA+     L   L E +P V+ +   NA+ A   V  G  DA +   +++RYMI   Y +
Sbjct: 411 VALVRGNVLREFLLEQFPRVQLVAAQNAADAMAMVAAGTADAAINPLISARYMISRQYRD 470

Query: 470 ELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTW 529
            L      G   A ++ A  RG  EL  I++KAL +I P E+  LT +W     +    W
Sbjct: 471 TLQVTSTVGTLPAHIALATNRGALELYSILDKALLSISPEEMDELTNRWRSEVVIDDSYW 530

Query: 530 DLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV 566
                       ++ LL+  +L WG YL R + + +V
Sbjct: 531 LRNRTTILQGFAVAALLLLVALGWGIYLRRLLEQLRV 567