Pairwise Alignments

Query, 1197 a.a., hybrid sensory histidine kinase in two-component regulatory system with EvgA (NCBI) from Escherichia coli BW25113

Subject, 1206 a.a., transporter substrate-binding domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score =  453 bits (1165), Expect = e-131
 Identities = 336/1145 (29%), Positives = 556/1145 (48%), Gaps = 47/1145 (4%)

Query: 42   LRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLR 101
            + L   + RWL  ++ LV+ V     A      +     GI ADY  L+   LN+ + +R
Sbjct: 44   VELDESDWRWLRERRTLVMGVSAPDYAPF-DLSNDNDFEGITADYTWLISLILNVPIEVR 102

Query: 102  EYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITF------PALVTTLHDS 155
             Y    + ++AL  G VD+V S        N   AA K L+++       P LVT   DS
Sbjct: 103  RYDTRDEVIEALKLGNVDLVGS-------ANGYEAADKALVLSRSYANDQPVLVTRAGDS 155

Query: 156  MRPLTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNII 215
                       +A + +Y   + +   +P+A ++ + + +QA+ SV+ G  D ++G  I 
Sbjct: 156  HSLSVDLAGKRVAMLYHYMQPDAVQAFYPQAQLLLYGSTHQAIGSVAFGQADVYLGDAIS 215

Query: 216  TSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNW 275
            T  +I++   +++ +  +         F    +++ L +++N  +  +    + E+ + W
Sbjct: 216  TRYLINKNHLNNVRMADFSALEVNPFGFAFTGDNIRLLKIVNAALAVIPAGQQMEILRRW 275

Query: 276  LDTGNLAFLNKP-LELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNI 334
               G   FL    L L++ E++W+++HP +KV       P S  +E G   G+  ++L+ 
Sbjct: 276  -SAGGSGFLEADRLRLSDSEQRWLEKHPRVKVAALDKFMPLSFFNEQGQFIGLSDEVLSR 334

Query: 335  ITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVM 394
            I+L+TGL F  +  S       ++S G  +++     S +R   V F   +++ PYV V 
Sbjct: 335  ISLRTGLKFEVVQGSSLPRQVDEVSAGQVEMMAVITPSVERSEKVRFTRPYLSNPYVLVA 394

Query: 395  QKAPDSEQTLKK--GMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDAL 452
            + + +   TL+   G ++A      L  Q+   YP + ++ V+N   A   V +G +DA 
Sbjct: 395  RASDEHLLTLEDMPGKRLAFIGGNSLAVQVARDYPGIVFVAVENPEQAMELVAKGGVDAT 454

Query: 453  VATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVL 512
            V + +++RYMI  +Y + L      G   A ++    R + EL  I+ KAL +I P E+ 
Sbjct: 455  VVSLISARYMIARHYRDRLRITSTVGTEPARIALGVNRSQLELYSILEKALLSITPEEMD 514

Query: 513  RLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLE 572
             LT  W     +    W  +         L+ +L+  +L W  YL   + +R   +  L 
Sbjct: 515  ELTNHWRSEIIIEDSYWISHRNVIIQGFGLAAVLLLVTLGWVLYLRNLIHKRAQAERALS 574

Query: 573  NQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYF---TADYYKNAMLPLENSDSPFK 629
            +Q+ F   L D  P+P YV + QG +++ N+A+   F     D     ++  +  + P  
Sbjct: 575  DQMRFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDVIGKTVVETDTGNPPQA 634

Query: 630  DVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAV-YICGWQDI 688
              F +A  ++   +    I+ +V ++  G     I  W  L    ++ N V  I GW D+
Sbjct: 635  QSF-HADYLSLMERGEPQIHDRVLKVPGG-GVLTIYQW-MLPYRDSNGNVVGMIAGWVDV 691

Query: 689  TETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRV 748
            +E + L+  L+  K +A  A  AK+ FLATMSHEIRTP+++++G +EL   +        
Sbjct: 692  SERQRLLGQLQEAKEEADAANRAKTTFLATMSHEIRTPMNAVIGMIELAQKNAEQGRVDQ 751

Query: 749  EAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSI 808
            +A+ +A    +S+L LIG+ILD+ +IE+G+  L     ++  ++ +    F  +A  K +
Sbjct: 752  DALEVASMASRSMLELIGDILDIARIETGHLSLTLAPANLHEMLASVARVFEGLARDKGL 811

Query: 809  ALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKI----TTSLGHIDDNHAV 864
             L           V IDP  FKQV+SNLL NA+KFT  G V++    T +L     N   
Sbjct: 812  LLHVELDPMIDRSVLIDPMRFKQVVSNLLGNAIKFTATGQVRLGAQCTPALASDPLN--- 868

Query: 865  IKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQ--QTGSGLGLMICKELIKNMQGDLSLES 922
            +++ + D+G G+S E+QQ+LF  + Q S   Q  ++GSGLGL+I + L + M G L L S
Sbjct: 869  LRLYVEDTGIGISAEDQQRLFNPFIQGSNNDQSARSGSGLGLVISRNLCEMMGGQLHLSS 928

Query: 923  HPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLG 982
              G GT   +T+ +E++   A   + +  P+     LS+L+ DD+P NRLLL RQL+ LG
Sbjct: 929  VLGKGTRVDVTLALELA--TAAPLSSSAPPVPPAHALSLLVVDDYPANRLLLTRQLSFLG 986

Query: 983  YDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLP-----IWGLT 1037
            + +  A DG +        H+D +ITD NMP MDG+ L R +R Q   L      + G T
Sbjct: 987  HRIVTAEDGAEGFALWQAGHFDGVITDSNMPVMDGYTLARDIRAQERRLGLVPCLLLGFT 1046

Query: 1038 ANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTAN 1097
            ANAQ  E E+    GM+ CLFKP  LD L+  L+     A +       D+ AL   T  
Sbjct: 1047 ANAQPEETERCRQAGMDGCLFKPTGLDDLRVALASRTASAAVEDAEPTFDLSALVMLTGG 1106

Query: 1098 DLQLMQEILMTFQHETHKD---LPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINI 1154
            +  ++ E+L+   +   +D   LPA  Q     D    H   HRI G A ++  Q L+  
Sbjct: 1107 EGAVLDELLLPLLNSLAEDRLLLPALQQ---HADFAKLHDLAHRIKGGARMVRAQALVAG 1163

Query: 1155 SHQLE 1159
               LE
Sbjct: 1164 CETLE 1168



 Score = 46.6 bits (109), Expect = 1e-08
 Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 3/237 (1%)

Query: 40  DPLRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLT 99
           D LRLS+ E RWL     + +A    +   L   + Q +  G++ + L+ +     +K  
Sbjct: 286 DRLRLSDSEQRWLEKHPRVKVAA-LDKFMPLSFFNEQGQFIGLSDEVLSRISLRTGLKFE 344

Query: 100 LREYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDS-MRP 158
           + + +   + +D ++ G+V+ +++ +  S   +  +  T+P +     LV    D  +  
Sbjct: 345 VVQGSSLPRQVDEVSAGQVE-MMAVITPSVERSEKVRFTRPYLSNPYVLVARASDEHLLT 403

Query: 159 LTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSS 218
           L       +A +        + + +P    ++  N  QA+  V+ G  D  + S I    
Sbjct: 404 LEDMPGKRLAFIGGNSLAVQVARDYPGIVFVAVENPEQAMELVAKGGVDATVVSLISARY 463

Query: 219 MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNW 275
           MI+R++   L +     +          +  + L  +L + + ++T E   E++ +W
Sbjct: 464 MIARHYRDRLRITSTVGTEPARIALGVNRSQLELYSILEKALLSITPEEMDELTNHW 520