Pairwise Alignments

Query, 1197 a.a., hybrid sensory histidine kinase in two-component regulatory system with EvgA (NCBI) from Escherichia coli BW25113

Subject, 1211 a.a., transporter substrate-binding domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score =  486 bits (1250), Expect = e-141
 Identities = 346/1160 (29%), Positives = 585/1160 (50%), Gaps = 66/1160 (5%)

Query: 44   LSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREY 103
            L+  + +WL +K+ LV+            T S +   G+ ADY  LL + L + + +  Y
Sbjct: 48   LNKAQRQWLQNKRELVLGTASPDYPPFDLTSSGRDYEGLTADYAGLLAKTLALPVKVLRY 107

Query: 104  ADHQKAMDALAEGEVDIVLSHLVTS---PPLNNDIAATKPLIITFPALVTTLHDSMRPLT 160
               + A+ AL  G++D+    L TS      N ++  ++P  +  P LVT   ++     
Sbjct: 108  PSREAAIRALETGDIDL----LGTSNGFEAANPNLTLSEPYAVDQPVLVTREGETRSLND 163

Query: 161  SPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMI 220
                + +A V +Y P   + + +P+A I ++ +   AL +V+    D F+G  I T  MI
Sbjct: 164  GLAGMRLALVYHYLPLSEVEKLYPQAIIRAYPSYQNALNAVAFDQADVFLGDTISTHYMI 223

Query: 221  SRYFTHSLNVVKY-YNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTG 279
            ++ +  ++++  +  +    ++F + + +  +L+ +++  + A+    R  +++ W    
Sbjct: 224  NKGYLKNIHMANFGKHEAYGFSFAMPQHQRTLLS-IVDAVLTAVPTNERETIAKRWSAGS 282

Query: 280  NLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQT 339
            ++   ++ L+LT+ E++W+K HP +KV+ N    P +  D  G+ RG+  D+L +I L+T
Sbjct: 283  DILLTDQKLQLTQREERWLKDHPVVKVIVNETFAPLTFFDAEGNFRGITADLLELIRLRT 342

Query: 340  GLNFSPITVSHNIHAGTQLSP-------GGWDIIPGAIYSEDRENNVLFAEAFITTPYVF 392
            GL F        IH G  LS        G  D+I   + S +RE  + F+  ++   YV 
Sbjct: 343  GLRFE-------IHRGRDLSAMIEQVDAGKVDMIGAIVPSAEREAQLNFSRPYLENSYVL 395

Query: 393  VMQKAPDSEQTLKK--GMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELD 450
            + +KA D+   L++  G ++AI     L S L+  +PEV+ ++  +   A   + +G+++
Sbjct: 396  LTRKAADAPSNLEQMAGKRLAITLGNPLESLLRRDFPEVQLVKASDTFRASELLAQGQVE 455

Query: 451  ALVATQLNSRYMIDH-YYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPS 509
              V + + + Y++    + ++L      G   A+ + A  R   EL  I++KAL +I P 
Sbjct: 456  GAVNSLVVANYLLSSSMFQDKLQISTSIGTAPATFALATARSATELSSILDKALLSIAPD 515

Query: 510  EVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQG 569
            E+  +  +W      +   W  Y +    +   + LL+  SL W  Y+ R ++ RK+ + 
Sbjct: 516  ELGVINSRWRGYTAASDSYWRNYHQLITRIIIGTGLLLLLSLAWNAYMRRQIKHRKMAER 575

Query: 570  DLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYY----KNAMLPLENSD 625
             L +Q  F +AL +  P+P YV + +G + + N ++   F         K+A+   E  +
Sbjct: 576  ALNDQFEFMRALVNETPHPIYVRDRKGLLQTCNDSYLQVFDVKREDVIGKSALQMSEALE 635

Query: 626  SPFKDVFSNAHEVTAETKE---NRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYI 682
            +  +   ++   V  E      +RT+Y +         K  I HW         +    I
Sbjct: 636  TDAEQYHADYQRVMTEGNPLILDRTLYIRG-------HKLTIYHWILPYRDSTGEVQGII 688

Query: 683  CGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGL 742
             GW DI+E R L + +   K +A +A  AKS FLATMSHEIRTP+++++G LEL      
Sbjct: 689  GGWIDISERRQLFDEIRAAKERADEANRAKSTFLATMSHEIRTPMNAVIGMLELTLKRAD 748

Query: 743  SKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAI 802
                   AI +AY + + LL LIG+ILD+ +IESG   L P+ V++  ++++    F  +
Sbjct: 749  QGHLDRPAIEVAYNSAKDLLELIGDILDIARIESGRLSLAPERVNLREVIESVVRVFDGL 808

Query: 803  AASKSIALSCS-STFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDN 861
            A  K+++LS       +   V IDP  FKQVLSNL+SNA+KFT  G V I   +   D  
Sbjct: 809  ARQKTLSLSLEFKPDRDDTEVLIDPLRFKQVLSNLVSNAIKFTERGQVNIKVEVLPTDVA 868

Query: 862  HAV-IKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQ--QTGSGLGLMICKELIKNMQGDL 918
              V +K+ + D+G G+S+++Q +LF+ ++Q     Q  ++G+GLGL+IC+ L   M G L
Sbjct: 869  QQVEMKLVVEDTGIGISRDDQLRLFEPFAQADNSGQLARSGAGLGLVICRSLCAMMGGQL 928

Query: 919  SLESHPGIGTTFTITIPVEISQQVATV-EAKAEQPITLPEKLSILIADDHPTNRLLLKRQ 977
            SL S P +GT   + + +   Q + T  E K E P T    L++L+ DDHP NRLL+ +Q
Sbjct: 929  SLSSVPMVGTQVHVNLKMARLQPLQTTHEPKPEAPATA-RVLNVLVVDDHPANRLLMCQQ 987

Query: 978  LNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKL-----REQNSSLP 1032
            L  LG+    A +G         + +DL+I D NMP M+G+EL+R +     REQ     
Sbjct: 988  LGYLGHQFTAAQNGAAGFQAWRQERFDLVIADCNMPIMNGYELSRSIREYEQREQRVPCV 1047

Query: 1033 IWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQ--YRHLDIEA 1090
            + G TANAQ  E+++    GMN CLFKP++L  L+       Q+A IAPQ    HLD+  
Sbjct: 1048 VLGFTANAQPEEKQRCAEAGMNDCLFKPISLTALE------RQLAQIAPQPAALHLDLGN 1101

Query: 1091 LKNNTANDLQ----LMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL 1146
             +  T  D Q    L++E+L + +H+  ++L A   A      +   +  H+I GAA I+
Sbjct: 1102 FEALTGGDPQLSWRLLEELLSSSRHD-RQELTALIGA--HAPLQDIIEQAHKIKGAARIV 1158

Query: 1147 NLQKLINISHQLEITPVSDD 1166
                L      LE   V  D
Sbjct: 1159 QATPLAGQCETLEQACVRGD 1178